BLASTX nr result

ID: Atractylodes22_contig00028542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028542
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   143   1e-32
ref|XP_002306520.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyas...   140   1e-31
ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas...   139   2e-31

>ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|222842838|gb|EEE80385.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/93 (73%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   VFGPVFIYLNSVMD-EDPLTLWEDAKRQMNVEVKSWPYSFPASEDFPKSNQRGNVYGKLL 177
           VFGPVF+Y NSVMD +DPL+LWEDAK QM +EV+SWPY FPASED+ KS+QRGNV G+LL
Sbjct: 265 VFGPVFMYFNSVMDGDDPLSLWEDAKLQMLIEVQSWPYGFPASEDYQKSDQRGNVSGRLL 324

Query: 178 VRDRFVCDKDMSIDGAYVGLAPPGEVGSWQKEC 276
           VRDRFV D     +GAYVGLA PG+VGSWQ+EC
Sbjct: 325 VRDRFVSDDYTPANGAYVGLALPGDVGSWQREC 357


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/93 (70%), Positives = 80/93 (86%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   VFGPVFIYLNSVM-DEDPLTLWEDAKRQMNVEVKSWPYSFPASEDFPKSNQRGNVYGKLL 177
           VFGPVF+YLNSV+  +DPL+LWEDAK Q  +EV+SWPY FPASED+PKS QRG+V G+LL
Sbjct: 284 VFGPVFMYLNSVLVGDDPLSLWEDAKEQTEIEVQSWPYFFPASEDYPKSEQRGSVSGRLL 343

Query: 178 VRDRFVCDKDMSIDGAYVGLAPPGEVGSWQKEC 276
           V+DRFV D  +S +GAYVGLAP G+VGSWQ+EC
Sbjct: 344 VKDRFVSDDYISANGAYVGLAPQGDVGSWQREC 376


>ref|XP_002306520.1| predicted protein [Populus trichocarpa] gi|222855969|gb|EEE93516.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/93 (73%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   VFGPVFIYLNSVMD-EDPLTLWEDAKRQMNVEVKSWPYSFPASEDFPKSNQRGNVYGKLL 177
           VFGPVFIYLNS  + EDPL LWEDAK QM  EV+SWPYSFPASEDF KS QRGNV G+LL
Sbjct: 265 VFGPVFIYLNSASNGEDPLFLWEDAKMQMMAEVQSWPYSFPASEDFQKSEQRGNVCGRLL 324

Query: 178 VRDRFVCDKDMSIDGAYVGLAPPGEVGSWQKEC 276
           V+DR + D  +   GAYVGLAPPG+VGSWQ EC
Sbjct: 325 VKDRNISDDYILASGAYVGLAPPGDVGSWQTEC 357


>ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/93 (72%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   VFGPVFIYLNSVMD-EDPLTLWEDAKRQMNVEVKSWPYSFPASEDFPKSNQRGNVYGKLL 177
           VFGPVFIYLNS  D  DPL LWEDAK QM+VEV+SWPYSFP SEDF K + RGNV G+LL
Sbjct: 284 VFGPVFIYLNSPYDGTDPLKLWEDAKLQMSVEVQSWPYSFPESEDFAKWDDRGNVSGRLL 343

Query: 178 VRDRFVCDKDMSIDGAYVGLAPPGEVGSWQKEC 276
           VR+R++ D  +S  GAYVGLAPPG+VGSWQ+EC
Sbjct: 344 VRERYINDDYVSAKGAYVGLAPPGDVGSWQREC 376


>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1
           [Vitis vinifera]
          Length = 643

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/93 (69%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   VFGPVFIYLNSVM-DEDPLTLWEDAKRQMNVEVKSWPYSFPASEDFPKSNQRGNVYGKLL 177
           VFGPVFIY+NSV  D DP  LWEDAK QM +EV+SWPYSFPASEDFP S+QRGNV G+LL
Sbjct: 281 VFGPVFIYVNSVFGDGDPFWLWEDAKEQMTIEVQSWPYSFPASEDFPSSDQRGNVSGRLL 340

Query: 178 VRDRFVCDKDMSIDGAYVGLAPPGEVGSWQKEC 276
           V+D ++ D  +    AYVGLAPPG+VGSWQ+EC
Sbjct: 341 VQDGYISDDYILASCAYVGLAPPGDVGSWQREC 373


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