BLASTX nr result

ID: Atractylodes22_contig00028514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028514
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein ...   135   1e-29
ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ...   133   4e-29
ref|XP_002530529.1| RNA binding protein, putative [Ricinus commu...   132   7e-29
ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein ...   132   9e-29
ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2...   130   3e-28

>ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 134

 Score =  135 bits (339), Expect = 1e-29
 Identities = 68/103 (66%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
 Frame = +2

Query: 182 LISRRGIASKLYIAGLSFYTTEKALLDAFSQYGQVVEATVTMDKVSSRSKGFGFVTYASQ 361
           L+S RGIA+KL++ GLS+YTT+K L +AFSQYGQV+EATV MD+VS +SKGFGFVT+AS 
Sbjct: 27  LVSYRGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASL 86

Query: 362 DEAEKAINEMNGKPLHGRIICVELARPRTPFGSGRG-VPIARG 487
           DEA  A++EMNGKPL+GR+I V  A+P T   S RG +PIARG
Sbjct: 87  DEAHTALSEMNGKPLNGRVIFVNYAKPTT---SSRGAIPIARG 126


>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score =  133 bits (335), Expect = 4e-29
 Identities = 68/102 (66%), Positives = 82/102 (80%)
 Frame = +2

Query: 182 LISRRGIASKLYIAGLSFYTTEKALLDAFSQYGQVVEATVTMDKVSSRSKGFGFVTYASQ 361
           LI  RGIASKL++ GLSFYTTEK L + FSQYGQVVEA + MD+VS RSKGFGFVT+AS+
Sbjct: 26  LICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASE 85

Query: 362 DEAEKAINEMNGKPLHGRIICVELARPRTPFGSGRGVPIARG 487
           +EA+KA  EM+GK L+GR I V+ A+PR  FG   G+PIARG
Sbjct: 86  EEAQKARTEMDGKELNGRTIFVDYAKPRADFGG--GMPIARG 125


>ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
           gi|223529933|gb|EEF31861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 127

 Score =  132 bits (333), Expect = 7e-29
 Identities = 66/101 (65%), Positives = 82/101 (81%)
 Frame = +2

Query: 185 ISRRGIASKLYIAGLSFYTTEKALLDAFSQYGQVVEATVTMDKVSSRSKGFGFVTYASQD 364
           +S RGIA+KL++ GLSFYTT+K L +AFSQYGQVVEAT+  D+V  RSKGFGFVT+AS+D
Sbjct: 24  VSYRGIATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASED 83

Query: 365 EAEKAINEMNGKPLHGRIICVELARPRTPFGSGRGVPIARG 487
           EA  A++EMNGK L+GR+I V+ A+PRT   S   VPIARG
Sbjct: 84  EAHNALSEMNGKTLNGRVIYVDYAKPRT--DSRNEVPIARG 122


>ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 134

 Score =  132 bits (332), Expect = 9e-29
 Identities = 67/103 (65%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
 Frame = +2

Query: 182 LISRRGIASKLYIAGLSFYTTEKALLDAFSQYGQVVEATVTMDKVSSRSKGFGFVTYASQ 361
           L+S R IA+KL++ GLS+YTT+K L +AFSQYGQV+EATV MD+VS +SKGFGFVT+AS 
Sbjct: 27  LVSFRAIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASL 86

Query: 362 DEAEKAINEMNGKPLHGRIICVELARPRTPFGSGRG-VPIARG 487
           DEA  A++EMNGKPL+GR+I V  A+P T   S RG +PIARG
Sbjct: 87  DEAHTALSEMNGKPLNGRVIFVNYAKPTT---SSRGAIPIARG 126


>ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  130 bits (327), Expect = 3e-28
 Identities = 64/101 (63%), Positives = 81/101 (80%)
 Frame = +2

Query: 185 ISRRGIASKLYIAGLSFYTTEKALLDAFSQYGQVVEATVTMDKVSSRSKGFGFVTYASQD 364
           I +RGI +KL++ GLS YTTE  L +AFSQYGQVVEA + MD+   RSKGFGFVTYAS+D
Sbjct: 32  IWQRGITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASED 91

Query: 365 EAEKAINEMNGKPLHGRIICVELARPRTPFGSGRGVPIARG 487
           EA+KA++EMNGK L+GR+I V+ A+ +T FG   G+PIARG
Sbjct: 92  EAQKALDEMNGKALNGRVIYVDYAKLKTNFGG--GIPIARG 130


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