BLASTX nr result

ID: Atractylodes22_contig00028506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028506
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm...    96   3e-18
ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II tra...    96   3e-18
ref|XP_002880440.1| hypothetical protein ARALYDRAFT_320077 [Arab...    93   3e-17
ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana] ...    92   4e-17
gb|AFK37706.1| unknown [Lotus japonicus]                               91   1e-16

>ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
           gi|223527360|gb|EEF29504.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/46 (95%), Positives = 46/46 (100%)
 Frame = +1

Query: 142 MECVVQGIIETQHVEALEILLQGLCGVHRERLKVHELCLKSGPNLG 279
           MECVVQGIIETQHVEALEILLQGLCGVHRERL++HELCLKSGPNLG
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVHRERLRIHELCLKSGPNLG 46


>ref|XP_002283731.1| PREDICTED: mediator of RNA polymerase II transcription subunit 18
           [Vitis vinifera] gi|302142417|emb|CBI19620.3| unnamed
           protein product [Vitis vinifera]
          Length = 216

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/46 (95%), Positives = 46/46 (100%)
 Frame = +1

Query: 142 MECVVQGIIETQHVEALEILLQGLCGVHRERLKVHELCLKSGPNLG 279
           MECVVQGIIETQHVEALEILLQGLCGVHRERL++HELCLKSGPNLG
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVHRERLRIHELCLKSGPNLG 46


>ref|XP_002880440.1| hypothetical protein ARALYDRAFT_320077 [Arabidopsis lyrata subsp.
           lyrata] gi|297326279|gb|EFH56699.1| hypothetical protein
           ARALYDRAFT_320077 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = +1

Query: 142 MECVVQGIIETQHVEALEILLQGLCGVHRERLKVHELCLKSGPNLG 279
           MECVVQGIIETQHVEALEILLQGLCGV RERL+VHELCLKSGPNLG
Sbjct: 3   MECVVQGIIETQHVEALEILLQGLCGVKRERLRVHELCLKSGPNLG 48


>ref|NP_565534.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75206349|sp|Q9SJZ6.1|MED18_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           18 gi|4544453|gb|AAD22361.1| expressed protein
           [Arabidopsis thaliana] gi|117168219|gb|ABK32192.1|
           At2g22370 [Arabidopsis thaliana]
           gi|330252204|gb|AEC07298.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 219

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = +1

Query: 142 MECVVQGIIETQHVEALEILLQGLCGVHRERLKVHELCLKSGPNLG 279
           MECVVQGIIETQHVEALEILLQGLCGV RERL+VHELCL+SGPNLG
Sbjct: 3   MECVVQGIIETQHVEALEILLQGLCGVQRERLRVHELCLRSGPNLG 48


>gb|AFK37706.1| unknown [Lotus japonicus]
          Length = 110

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/46 (89%), Positives = 45/46 (97%)
 Frame = +1

Query: 142 MECVVQGIIETQHVEALEILLQGLCGVHRERLKVHELCLKSGPNLG 279
           MECVVQGIIETQHVEALEILLQGLCGV RERL++HE+CLK+GPNLG
Sbjct: 1   MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKNGPNLG 46


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