BLASTX nr result

ID: Atractylodes22_contig00028467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028467
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613273.1| RING finger protein [Medicago truncatula] gi...   176   1e-41
ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like...   172   2e-40
ref|XP_002521028.1| ring finger protein, putative [Ricinus commu...   170   6e-40
ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...   170   7e-40
ref|XP_003532021.1| PREDICTED: RING-H2 finger protein ATL46-like...   170   7e-40

>ref|XP_003613273.1| RING finger protein [Medicago truncatula]
           gi|355514608|gb|AES96231.1| RING finger protein
           [Medicago truncatula]
          Length = 368

 Score =  176 bits (445), Expect = 1e-41
 Identities = 85/139 (61%), Positives = 105/139 (75%)
 Frame = -2

Query: 418 TNSKTSSTVIFARNIVIVIAIMFFICGLLHLLVRYLMKRKRXXXXXXXXXXXXSRFQESV 239
           + +K S  ++F   I++++AI+FFI G LHLLVR+L+K +             +RF E  
Sbjct: 41  SGNKISPAILF---IIVILAIIFFILGFLHLLVRFLIKHRSSSSSSTTTISQSNRFPEM- 96

Query: 238 GDDGDAYERQLQQLFNLHDSGLDQAFIDALPVFSYKELMGLKEPFDCAVCLCEFTKQDNL 59
             + DAY+RQLQQLFNLHDSGLDQAFIDALPVF YKE++GLKEPFDCAVCLCEF +QD L
Sbjct: 97  -SESDAYQRQLQQLFNLHDSGLDQAFIDALPVFIYKEIIGLKEPFDCAVCLCEFLEQDKL 155

Query: 58  RLLPLCSHAFHMHCIDTWL 2
           RLLP C+HAFH+ CIDTWL
Sbjct: 156 RLLPNCNHAFHISCIDTWL 174


>ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 380

 Score =  172 bits (435), Expect = 2e-40
 Identities = 82/139 (58%), Positives = 107/139 (76%)
 Frame = -2

Query: 418 TNSKTSSTVIFARNIVIVIAIMFFICGLLHLLVRYLMKRKRXXXXXXXXXXXXSRFQESV 239
           + ++ S  ++F   I++++A++FFI GLLHLLVR+L+K++              R+ +  
Sbjct: 52  SGNRISPAILF---IIVILAVLFFILGLLHLLVRFLIKQRSSSNNSSIPQSN--RYPDM- 105

Query: 238 GDDGDAYERQLQQLFNLHDSGLDQAFIDALPVFSYKELMGLKEPFDCAVCLCEFTKQDNL 59
             D DAY+RQLQQLF+LHDSGLDQAFIDALPVF YKE++GLKEPFDCAVCLCEF +QD L
Sbjct: 106 -SDSDAYQRQLQQLFHLHDSGLDQAFIDALPVFFYKEIIGLKEPFDCAVCLCEFLEQDKL 164

Query: 58  RLLPLCSHAFHMHCIDTWL 2
           RLLP+C+HAFH+ CIDTWL
Sbjct: 165 RLLPMCNHAFHIECIDTWL 183


>ref|XP_002521028.1| ring finger protein, putative [Ricinus communis]
           gi|223539865|gb|EEF41445.1| ring finger protein,
           putative [Ricinus communis]
          Length = 374

 Score =  170 bits (431), Expect = 6e-40
 Identities = 83/139 (59%), Positives = 106/139 (76%)
 Frame = -2

Query: 418 TNSKTSSTVIFARNIVIVIAIMFFICGLLHLLVRYLMKRKRXXXXXXXXXXXXSRFQESV 239
           + +K S  ++F   I++++A++FFI GLLHLLVR+L+K +              R+ E  
Sbjct: 45  SGNKISPAILF---IIVILAVIFFISGLLHLLVRFLIKHRSSSSSSVSESN---RYPEMS 98

Query: 238 GDDGDAYERQLQQLFNLHDSGLDQAFIDALPVFSYKELMGLKEPFDCAVCLCEFTKQDNL 59
           G D  A++RQLQQLF+LHDSGLDQAFIDALPVF YKE+MGLKEPFDCAVCLCE++++D L
Sbjct: 99  GSD--AFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIMGLKEPFDCAVCLCEYSEKDKL 156

Query: 58  RLLPLCSHAFHMHCIDTWL 2
           RLLP CSHAFH+ CIDTWL
Sbjct: 157 RLLPACSHAFHIDCIDTWL 175


>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score =  170 bits (430), Expect = 7e-40
 Identities = 82/139 (58%), Positives = 107/139 (76%)
 Frame = -2

Query: 418 TNSKTSSTVIFARNIVIVIAIMFFICGLLHLLVRYLMKRKRXXXXXXXXXXXXSRFQESV 239
           + S+ S  V+F   I++++A++FFI GLLHLLVR+L+K +              R+QE+ 
Sbjct: 50  SGSRISPAVLF---IIVILAVIFFISGLLHLLVRFLVKHRSSSSISQSN-----RYQET- 100

Query: 238 GDDGDAYERQLQQLFNLHDSGLDQAFIDALPVFSYKELMGLKEPFDCAVCLCEFTKQDNL 59
                A++RQLQQLF+LHDSGLDQAFIDALPVF YK+++GLKEPFDCAVCLCEF+++D L
Sbjct: 101 -SSSHAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKDIVGLKEPFDCAVCLCEFSQEDKL 159

Query: 58  RLLPLCSHAFHMHCIDTWL 2
           RLLP+CSHAFH+ CIDTWL
Sbjct: 160 RLLPMCSHAFHIECIDTWL 178


>ref|XP_003532021.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 384

 Score =  170 bits (430), Expect = 7e-40
 Identities = 80/139 (57%), Positives = 106/139 (76%)
 Frame = -2

Query: 418 TNSKTSSTVIFARNIVIVIAIMFFICGLLHLLVRYLMKRKRXXXXXXXXXXXXSRFQESV 239
           + ++ S  V+F   I +++AI+FFI GLLHLLVR+L++ +             +R+   +
Sbjct: 49  SGTRISPAVVF---IFVILAIVFFISGLLHLLVRFLIRHR---PSSSSSISQSNRYPNDM 102

Query: 238 GDDGDAYERQLQQLFNLHDSGLDQAFIDALPVFSYKELMGLKEPFDCAVCLCEFTKQDNL 59
            +  D Y+RQLQQLFNLHDSGLDQAF+DALPVF YK+++GLKEPFDCAVCLC+F++QD L
Sbjct: 103 SESNDPYQRQLQQLFNLHDSGLDQAFMDALPVFLYKDIIGLKEPFDCAVCLCQFSEQDML 162

Query: 58  RLLPLCSHAFHMHCIDTWL 2
           RLLPLC+HAFH+ CIDTWL
Sbjct: 163 RLLPLCNHAFHIDCIDTWL 181


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