BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028449
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...    71   3e-20
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]               67   1e-19
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    71   2e-18
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...    66   2e-17
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...    66   3e-17

>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score = 71.2 bits (173), Expect(2) = 3e-20
 Identities = 37/108 (34%), Positives = 56/108 (51%)
 Frame = -1

Query: 343 SIEFDPFGFSVKXXXXXXXXXXXXXXXXXXLYPMSSSRCVSQSPSLAAISFDVWHSGLSH 164
           SIEFDPFGFS+K                      + ++  + + +  A S D+WH  L H
Sbjct: 365 SIEFDPFGFSIKDLRTKRTLLRNDSSGDLYPVFPAFNKTSAPASTFLAQSSDIWHRRLPH 424

Query: 163 PVTPVLSHLRTSSFINCNKETSSTVCNSCQISKHKRLQFHESLSNTLA 20
           P   VL  L + S+ + NK+T +  CN+CQI KH +L F+ S S +++
Sbjct: 425 PSNDVLKTLISYSYFHPNKKTLTLTCNACQIGKHVKLPFYSSTSKSIS 472



 Score = 52.4 bits (124), Expect(2) = 3e-20
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = -3

Query: 515 SNSRSICVGNGTSIQIQGSGTNHINFAHRLAPLTNVLYTPNIIKNLISVRQFTKDN 348
           S  +S+  GNG  I +  +G+  I    R   L NVL TP+IIKNL+SVR+FTKDN
Sbjct: 307 SIGKSVIFGNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFTKDN 362


>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score = 66.6 bits (161), Expect(2) = 1e-19
 Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
 Frame = -1

Query: 340 IEFDPFGFSVKXXXXXXXXXXXXXXXXXXLY--PMSSSRCVSQSPSLAAISFDVWHSGLS 167
           IEFDPFG SVK                   +  P +S+  +  +P+       +WH  L 
Sbjct: 547 IEFDPFGLSVKDLQTRNVIARCNSSGDLYPFFPPATSATALLAAPA------SLWHRRLG 600

Query: 166 HPVTPVLSHLRTSSFINCNKETSSTVCNSCQISKHKRLQFHESLSNTLAPFDIIH 2
           H     LS L +SS I+CNK+    +C++CQ+ +H RL F  S S     FD+IH
Sbjct: 601 HLGREALSQLVSSSAISCNKDDDYHLCHACQLGRHTRLPFSTSTSRATNNFDLIH 655



 Score = 54.7 bits (130), Expect(2) = 1e-19
 Identities = 27/59 (45%), Positives = 37/59 (62%)
 Frame = -3

Query: 515 SNSRSICVGNGTSIQIQGSGTNHINFAHRLAPLTNVLYTPNIIKNLISVRQFTKDNHVY 339
           S   SI VGNG  + +   G+   +F HR   L  VL +P+IIKNLIS+R+FT DN+ +
Sbjct: 488 STPSSIIVGNGALLPVTTIGSRIFSFPHRNLVLNKVLVSPHIIKNLISIRRFTTDNNCF 546


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 70.9 bits (172), Expect(2) = 2e-18
 Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
 Frame = -1

Query: 343 SIEFDPFGFSVKXXXXXXXXXXXXXXXXXXLYPMSSSRCVSQSPSLAAISFD--VWHSGL 170
           +IEFDPFGFSVK                   Y ++ S   S   +LAA + D  +WH  L
Sbjct: 444 TIEFDPFGFSVKDLKTRNKLLRCDSSGPL--YSVTPSSYPSSHHALAATTSDSFIWHRRL 501

Query: 169 SHPVTPVLSHLRTSSFINCNKETSSTVCNSCQISKHKRLQFHESLSNTLAPFDIIH 2
            HP + +LSHL +S  I+  K   +++C +CQ+ KH RL F  S +   + F+I+H
Sbjct: 502 GHPSSTLLSHLLSSLSISVPKTDLTSLCQACQLGKHTRLPFFNSNTIASSLFEIVH 557



 Score = 46.2 bits (108), Expect(2) = 2e-18
 Identities = 23/59 (38%), Positives = 34/59 (57%)
 Frame = -3

Query: 524 FPSSNSRSICVGNGTSIQIQGSGTNHINFAHRLAPLTNVLYTPNIIKNLISVRQFTKDN 348
           F +S    + VGNG+   ++  G   +++  R   L NVL  P I+KNL+SVR+F  DN
Sbjct: 383 FNTSTMPLVTVGNGSLAPVETIGHGTLSYPSRSFSLRNVLVCPAIVKNLVSVRKFVTDN 441


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score = 66.2 bits (160), Expect(2) = 2e-17
 Identities = 37/114 (32%), Positives = 56/114 (49%)
 Frame = -1

Query: 343 SIEFDPFGFSVKXXXXXXXXXXXXXXXXXXLYPMSSSRCVSQSPSLAAISFDVWHSGLSH 164
           SIEFD FGFSVK                    P+++    + S    A S  +WH  L H
Sbjct: 440 SIEFDEFGFSVKGLRTRRVILRCNSRGDLYTLPIAAPAIAAHS--FLAQSSTLWHRRLGH 497

Query: 163 PVTPVLSHLRTSSFINCNKETSSTVCNSCQISKHKRLQFHESLSNTLAPFDIIH 2
           P +  +  L   + + C K   S +C++C++ KH RL F  S S+T +PF+++H
Sbjct: 498 PSSAAIQTLHKLAILPCTKIDHS-LCHACKLGKHTRLPFSRSQSSTSSPFELVH 550



 Score = 47.4 bits (111), Expect(2) = 2e-17
 Identities = 21/52 (40%), Positives = 34/52 (65%)
 Frame = -3

Query: 500 ICVGNGTSIQIQGSGTNHINFAHRLAPLTNVLYTPNIIKNLISVRQFTKDNH 345
           I VGNG +I +   GT+ +        L N+L  P++++NL+S+RQFT+DN+
Sbjct: 387 ITVGNGHTIPVICHGTSFLPIGTTKFDLKNILVAPSLVRNLLSIRQFTRDNN 438


>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score = 66.2 bits (160), Expect(2) = 3e-17
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
 Frame = -1

Query: 343 SIEFDPFGFSVKXXXXXXXXXXXXXXXXXXLYPMSSSRCVSQSPSLAA-----ISFDVWH 179
           SIEFD FGFS+K                    P ++       PS+AA      S  +WH
Sbjct: 432 SIEFDEFGFSIKDPQTRRVILRCNSHGELYTLPAAA-------PSIAAHYNLATSSTLWH 484

Query: 178 SGLSHPVTPVLSHLRTSSFINCNKETSSTVCNSCQISKHKRLQFHESLSNTLAPFDIIH 2
             L HP    ++ L+  S I  +K T++++C++CQ+ KH RL F++S S+T +PF+++H
Sbjct: 485 RRLGHPGPTAVTTLQHLSAIPRSK-TNNSLCHACQLGKHTRLPFNKSTSSTSSPFELVH 542



 Score = 47.0 bits (110), Expect(2) = 3e-17
 Identities = 22/51 (43%), Positives = 33/51 (64%)
 Frame = -3

Query: 500 ICVGNGTSIQIQGSGTNHINFAHRLAPLTNVLYTPNIIKNLISVRQFTKDN 348
           I VGNG SI +   GT+ +        L +VL  P++++NL+S+RQFT+DN
Sbjct: 379 ITVGNGHSIPVVCRGTSFLPIGTTRFDLRHVLVAPSLVRNLLSIRQFTRDN 429