BLASTX nr result

ID: Atractylodes22_contig00028287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028287
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like i...   166   2e-39
ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like i...   166   2e-39
ref|XP_002516244.1| polygalacturonase, putative [Ricinus communi...   165   5e-39
ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [...   163   2e-38
ref|XP_002324728.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36

>ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
          Length = 491

 Score =  166 bits (421), Expect = 2e-39
 Identities = 86/141 (60%), Positives = 100/141 (70%), Gaps = 5/141 (3%)
 Frame = -1

Query: 409 MVDTLTSSPSMWRFHH-----RRWIHSLFSSYKTLITLLWILGFTSLFIWQRNIVDGFLX 245
           MV+T T    +  FHH     RRW+ + F+S+KTL+TLLWI  F S+F+WQRNIV GFL 
Sbjct: 2   MVETST----LGHFHHQRLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRNIVGGFLV 57

Query: 244 XXXXXXXXXXXXXXXFAFNLTDFGAVGDGVTINTQAFENAVFAISKLGKRGGGQLNVPAG 65
                           AFNLTDFG VGDGVT+NT+AFE AV A+SK GK+GG QLNVP G
Sbjct: 58  YGGIPGRPMPMLRPM-AFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPG 116

Query: 64  KWLTAPFNLTSHMTLFLAEDA 2
           +WLTAPFNLTSHMTLFLAEDA
Sbjct: 117 RWLTAPFNLTSHMTLFLAEDA 137


>ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
          Length = 492

 Score =  166 bits (421), Expect = 2e-39
 Identities = 86/141 (60%), Positives = 100/141 (70%), Gaps = 5/141 (3%)
 Frame = -1

Query: 409 MVDTLTSSPSMWRFHH-----RRWIHSLFSSYKTLITLLWILGFTSLFIWQRNIVDGFLX 245
           MV+T T    +  FHH     RRW+ + F+S+KTL+TLLWI  F S+F+WQRNIV GFL 
Sbjct: 2   MVETST----LGHFHHQRLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRNIVGGFLV 57

Query: 244 XXXXXXXXXXXXXXXFAFNLTDFGAVGDGVTINTQAFENAVFAISKLGKRGGGQLNVPAG 65
                           AFNLTDFG VGDGVT+NT+AFE AV A+SK GK+GG QLNVP G
Sbjct: 58  YGGIPGRPMPMLRPM-AFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPG 116

Query: 64  KWLTAPFNLTSHMTLFLAEDA 2
           +WLTAPFNLTSHMTLFLAEDA
Sbjct: 117 RWLTAPFNLTSHMTLFLAEDA 137


>ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
           gi|223544730|gb|EEF46246.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 494

 Score =  165 bits (418), Expect = 5e-39
 Identities = 81/138 (58%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
 Frame = -1

Query: 397 LTSSPSMWRFHH-----RRWIHSLFSSYKTLITLLWILGFTSLFIWQRNIV-DGFLXXXX 236
           +  + S+ R H+     +RW+ + FSS+KTL T+LWI  F S+F+WQRN+V DGF     
Sbjct: 2   MLETASLGRLHYQRLELKRWVPTFFSSHKTLFTVLWIAAFASVFVWQRNVVGDGFAVFFK 61

Query: 235 XXXXXXXXXXXXFAFNLTDFGAVGDGVTINTQAFENAVFAISKLGKRGGGQLNVPAGKWL 56
                        AFNLTDFG VGDGVT+NT+AFE AV AISKLGK+GGGQLNVP G+W+
Sbjct: 62  ASPMRPMPKLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRWV 121

Query: 55  TAPFNLTSHMTLFLAEDA 2
           TAPFNLTSHMTLFLAED+
Sbjct: 122 TAPFNLTSHMTLFLAEDS 139


>ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 491

 Score =  163 bits (413), Expect = 2e-38
 Identities = 80/137 (58%), Positives = 97/137 (70%), Gaps = 5/137 (3%)
 Frame = -1

Query: 397 LTSSPSMWRFHH-----RRWIHSLFSSYKTLITLLWILGFTSLFIWQRNIVDGFLXXXXX 233
           +  + ++ RFHH     RRW+ + F+S+KTL+T LWI  F S+F+WQRNI  GFL     
Sbjct: 1   MVENSTLGRFHHQRLDLRRWVPAFFTSHKTLLTFLWIAAFASVFLWQRNIAGGFLVYGGI 60

Query: 232 XXXXXXXXXXXFAFNLTDFGAVGDGVTINTQAFENAVFAISKLGKRGGGQLNVPAGKWLT 53
                       AFNLTDFG VGDGVT+NT+AF+ AV A+SK GK+GG QLNVP G+WLT
Sbjct: 61  PARPMPMLRPM-AFNLTDFGGVGDGVTLNTEAFKRAVSAVSKFGKKGGAQLNVPPGRWLT 119

Query: 52  APFNLTSHMTLFLAEDA 2
           APFNLTSHMTLFLAEDA
Sbjct: 120 APFNLTSHMTLFLAEDA 136


>ref|XP_002324728.1| predicted protein [Populus trichocarpa] gi|222866162|gb|EEF03293.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  157 bits (398), Expect = 1e-36
 Identities = 84/141 (59%), Positives = 98/141 (69%), Gaps = 5/141 (3%)
 Frame = -1

Query: 409 MVDTLTSSPSMWRFHH-----RRWIHSLFSSYKTLITLLWILGFTSLFIWQRNIVDGFLX 245
           MV+T+ +SP   RF++     +R + +  SS+K L TLLWI  F S+F+WQRN V G   
Sbjct: 1   MVETI-ASPLASRFNYQRLDLKRCVPAFLSSHKILFTLLWIAAFASVFLWQRNAVRGGFA 59

Query: 244 XXXXXXXXXXXXXXXFAFNLTDFGAVGDGVTINTQAFENAVFAISKLGKRGGGQLNVPAG 65
                           AFNLTDFGAVGDGVT+NT+AFE AV AISKL +RGGGQLNVP G
Sbjct: 60  AFWHGPVRPIPKLRPVAFNLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPG 119

Query: 64  KWLTAPFNLTSHMTLFLAEDA 2
           KWLTAPFNLTSHMTLFLAEDA
Sbjct: 120 KWLTAPFNLTSHMTLFLAEDA 140


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