BLASTX nr result

ID: Atractylodes22_contig00028286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028286
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    92   4e-17
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    89   5e-16
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    84   1e-14
ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    75   4e-12
gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp...    74   1e-11

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/67 (59%), Positives = 48/67 (71%)
 Frame = +1

Query: 22  RKLEMPICDGLDPDGWVLRAERYCKLNRLTNEECLEVAVIAFEGDALRWYLWENKRRPIV 201
           +KL+MP  D  DPDGW+LR ER+     LT+ E +E AV+A EGDALRWY WENKRRP  
Sbjct: 175 KKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALRWYQWENKRRPFR 234

Query: 202 RWEELKS 222
            WE +KS
Sbjct: 235 NWESMKS 241


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 34/68 (50%), Positives = 53/68 (77%)
 Frame = +1

Query: 16  KGRKLEMPICDGLDPDGWVLRAERYCKLNRLTNEECLEVAVIAFEGDALRWYLWENKRRP 195
           + +KL++P+  G +PDGW++RAER+ +  RLT +E +E AV++ +G+AL WY WEN+RRP
Sbjct: 98  RAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEALLWYQWENRRRP 157

Query: 196 IVRWEELK 219
           I RW E++
Sbjct: 158 IHRWSEMR 165


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 35/69 (50%), Positives = 49/69 (71%)
 Frame = +1

Query: 16  KGRKLEMPICDGLDPDGWVLRAERYCKLNRLTNEECLEVAVIAFEGDALRWYLWENKRRP 195
           K ++L++PI  G +PDGW+LR ERY    RL  EE LE AV+A +G+AL W+ WE++ RP
Sbjct: 78  KAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWFQWEHRHRP 137

Query: 196 IVRWEELKS 222
           I  W E+K+
Sbjct: 138 ITGWPEMKA 146


>ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/68 (48%), Positives = 45/68 (66%)
 Frame = +1

Query: 16  KGRKLEMPICDGLDPDGWVLRAERYCKLNRLTNEECLEVAVIAFEGDALRWYLWENKRRP 195
           K +KLEMPI  G + + WV RAE Y  +N L NEE ++VAVI+F  D + W+ W N R+ 
Sbjct: 82  KYKKLEMPIITGDNSESWVYRAEHYFDINELANEEKVKVAVISFGQDEVNWFRWSNNRKT 141

Query: 196 IVRWEELK 219
           +  WE+LK
Sbjct: 142 VTSWEDLK 149


>gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
          Length = 473

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 30/69 (43%), Positives = 47/69 (68%)
 Frame = +1

Query: 13  IKGRKLEMPICDGLDPDGWVLRAERYCKLNRLTNEECLEVAVIAFEGDALRWYLWENKRR 192
           IK +KLEMP+ +G DPDGW+ +AE Y +++ L  +E L++A+++ EG  L W+ W   R+
Sbjct: 94  IKFKKLEMPVFNGEDPDGWIYKAEYYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRK 153

Query: 193 PIVRWEELK 219
               W+ELK
Sbjct: 154 RFRSWKELK 162


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