BLASTX nr result

ID: Atractylodes22_contig00028285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028285
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera...   117   1e-24
ref|NP_190452.1| polynucleotide adenylyltransferase domain and R...   113   2e-23
ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002875928.1| predicted protein [Arabidopsis lyrata subsp....   110   1e-22
ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus commun...   105   5e-21

>ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera]
           gi|296088167|emb|CBI35659.3| unnamed protein product
           [Vitis vinifera]
          Length = 537

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/119 (52%), Positives = 80/119 (67%)
 Frame = +1

Query: 7   PVINRFHKARQSCSVAAIXXXXXXXXXXXXDFQISTARNVKGGSDDCKPHEWKKLCSKEL 186
           P++   HK R   +VA +            + +   A +   G+   K  EWKKL SK+L
Sbjct: 19  PLVYCVHKVRHRSNVATVESPPEPVGVTKEE-EPHWATSDGRGNGASKAPEWKKLNSKDL 77

Query: 187 GIKTSKITKPAKFVLNVLREKGYEVYLVGGCVRDLVLKKTPKDFDILTSAELKEVMGAF 363
           GI+TS I KP ++VLN L++KGYEVYLVGGCVRDL+LK+TPKDFDI+TSAELKEV+ AF
Sbjct: 78  GIRTSMIAKPTRYVLNGLKKKGYEVYLVGGCVRDLILKRTPKDFDIITSAELKEVLRAF 136


>ref|NP_190452.1| polynucleotide adenylyltransferase domain and RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|7576221|emb|CAB87911.1| putative protein [Arabidopsis
           thaliana] gi|332644940|gb|AEE78461.1| polynucleotide
           adenylyltransferase domain and RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 881

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/80 (67%), Positives = 66/80 (82%)
 Frame = +1

Query: 127 KGGSDDCKPHEWKKLCSKELGIKTSKITKPAKFVLNVLREKGYEVYLVGGCVRDLVLKKT 306
           KG +   K  EWKKL SK+LGI TS I+KP + VLN L+ KGY+VYLVGGCVRDL+LK+T
Sbjct: 50  KGSNKTSKAPEWKKLNSKDLGITTSMISKPTRIVLNGLKSKGYDVYLVGGCVRDLILKRT 109

Query: 307 PKDFDILTSAELKEVMGAFT 366
           PKDFDILTSAEL+EV+ +F+
Sbjct: 110 PKDFDILTSAELREVVRSFS 129


>ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|222858834|gb|EEE96381.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score =  111 bits (277), Expect = 7e-23
 Identities = 63/119 (52%), Positives = 76/119 (63%)
 Frame = +1

Query: 10  VINRFHKARQSCSVAAIXXXXXXXXXXXXDFQISTARNVKGGSDDCKPHEWKKLCSKELG 189
           + +R  K R S SVAAI            D Q +  +       DCK  EWKKL SKELG
Sbjct: 20  LFHRIQKVRFS-SVAAIETL---------DVQENVIKGNSRNLGDCKAPEWKKLSSKELG 69

Query: 190 IKTSKITKPAKFVLNVLREKGYEVYLVGGCVRDLVLKKTPKDFDILTSAELKEVMGAFT 366
           +  S I+ P K VLN L++ GYEVYLVGGCVRDL+LK+ PKDFDI+TSAELKEV+  F+
Sbjct: 70  LSNSLISMPTKKVLNGLKKNGYEVYLVGGCVRDLILKRIPKDFDIITSAELKEVVRTFS 128


>ref|XP_002875928.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321766|gb|EFH52187.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/80 (66%), Positives = 64/80 (80%)
 Frame = +1

Query: 127 KGGSDDCKPHEWKKLCSKELGIKTSKITKPAKFVLNVLREKGYEVYLVGGCVRDLVLKKT 306
           KG     K  EWKKL SK+LGI +S I+KP + VLN L+ KGY+VYLVGGCVRDL+LK+T
Sbjct: 49  KGSDRTSKAPEWKKLNSKDLGITSSMISKPTRLVLNGLKSKGYDVYLVGGCVRDLILKRT 108

Query: 307 PKDFDILTSAELKEVMGAFT 366
           PKDFDILTSAEL+EV+  F+
Sbjct: 109 PKDFDILTSAELREVVRTFS 128


>ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223550224|gb|EEF51711.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 524

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/75 (65%), Positives = 60/75 (80%)
 Frame = +1

Query: 142 DCKPHEWKKLCSKELGIKTSKITKPAKFVLNVLREKGYEVYLVGGCVRDLVLKKTPKDFD 321
           DC   +WKKL SKELGI  S I  P + +LN L+++GYEVYLVGGCVRDL+LK+ PKDFD
Sbjct: 61  DCNGPKWKKLNSKELGITNSMIASPTRKILNGLKQRGYEVYLVGGCVRDLILKRIPKDFD 120

Query: 322 ILTSAELKEVMGAFT 366
           I+TSAEL+EV  AF+
Sbjct: 121 IITSAELREVARAFS 135


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