BLASTX nr result

ID: Atractylodes22_contig00028229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028229
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   231   6e-59
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   231   6e-59
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   230   1e-58
ref|XP_002534470.1| transcription initiation factor iib, putativ...   229   1e-58
dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]                          228   4e-58

>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|296088031|emb|CBI35314.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  231 bits (588), Expect = 6e-59
 Identities = 110/121 (90%), Positives = 116/121 (95%)
 Frame = -2

Query: 364 MADAYCDDCKRSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 185
           MADA+C DCK++TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 184 GPTNILLNDGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPDRSLILAFKTIATMSDRLG 5
           GP+N LL DGGLSTVI+KPNGV+ DFLSSSLGRWQNRGSNPDR LILAFKTIATMSDRLG
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 4   L 2
           L
Sbjct: 121 L 121


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  231 bits (588), Expect = 6e-59
 Identities = 110/121 (90%), Positives = 116/121 (95%)
 Frame = -2

Query: 364 MADAYCDDCKRSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 185
           MADA+C DCK++TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 184 GPTNILLNDGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPDRSLILAFKTIATMSDRLG 5
           GP+N LL DGGLSTVI+KPNGV+ DFLSSSLGRWQNRGSNPDR LILAFKTIATMSDRLG
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 4   L 2
           L
Sbjct: 121 L 121


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
           sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
           transcription initiation factor IIB-2-like [Cucumis
           sativus]
          Length = 312

 Score =  230 bits (586), Expect = 1e-58
 Identities = 110/121 (90%), Positives = 114/121 (94%)
 Frame = -2

Query: 364 MADAYCDDCKRSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 185
           M+DA+C DCKR TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 184 GPTNILLNDGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPDRSLILAFKTIATMSDRLG 5
           GPTN LL DGGLSTVI+KPNG T +FLSSSLGRWQNRGSNPDR LILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 4   L 2
           L
Sbjct: 121 L 121


>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223525233|gb|EEF27913.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score =  229 bits (585), Expect = 1e-58
 Identities = 110/121 (90%), Positives = 113/121 (93%)
 Frame = -2

Query: 364 MADAYCDDCKRSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 185
           M DAYC DCKR TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MGDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 184 GPTNILLNDGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPDRSLILAFKTIATMSDRLG 5
           GPTN LL DGGLSTVI+KPNG + +FLSSSLGRWQNRGSNPDR LILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 4   L 2
           L
Sbjct: 121 L 121


>dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]
          Length = 312

 Score =  228 bits (581), Expect = 4e-58
 Identities = 109/121 (90%), Positives = 113/121 (93%)
 Frame = -2

Query: 364 MADAYCDDCKRSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 185
           M DA+C DCKR TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MGDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 184 GPTNILLNDGGLSTVISKPNGVTSDFLSSSLGRWQNRGSNPDRSLILAFKTIATMSDRLG 5
           GPTN LL DGGLSTVI+KPNG + +FLSSSLGRWQNRGSNPDR LILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 4   L 2
           L
Sbjct: 121 L 121


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