BLASTX nr result

ID: Atractylodes22_contig00028120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028120
         (1767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin...   685   0.0  
ref|XP_002512627.1| nucleic acid binding protein, putative [Rici...   666   0.0  
ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containin...   647   0.0  
ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containin...   643   0.0  
ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|2...   638   e-180

>ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
            isoform 1 [Vitis vinifera]
          Length = 441

 Score =  685 bits (1767), Expect = 0.0
 Identities = 321/442 (72%), Positives = 358/442 (80%), Gaps = 1/442 (0%)
 Frame = +1

Query: 208  MDFDTGITMSRPPVTAQVSSSLSPPLDEDALWQLNLRSREGMESGPYPVREGETDCSYYI 387
            M+FD GI M R  VT    SSLSP L++DA+WQ+NLRS E MESGPYP R GE DCSYYI
Sbjct: 1    MEFDAGIPMPRGQVTE--GSSLSPSLNQDAMWQMNLRSSETMESGPYPERPGEPDCSYYI 58

Query: 388  RTGLCRFGATCRFNHPPNRKLAIATAKMRGEYPERAGQPECQYYLKTGACKFGATCKFHH 567
            RTGLCRFG TCRFNHPPNRKLAIATA+M+GE+PER GQPECQYYLKTG CKFGATCKFHH
Sbjct: 59   RTGLCRFGITCRFNHPPNRKLAIATARMKGEFPERMGQPECQYYLKTGTCKFGATCKFHH 118

Query: 568  PRDKAGMAGQVLLNALGYPLHPDEAECAYYLRTGQCKFGNTCKFHHPQPSNMMVTFGGSP 747
            PRDKAG+AG+V LN LGYPL PDE +CAYYLRTGQCKFG+TCKFHHPQPS+MMV+  GSP
Sbjct: 119  PRDKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGSTCKFHHPQPSSMMVSLRGSP 178

Query: 748  VYPAVQSPTSPGQQSYPGGTTNWSLSRASFVPSARWQGPSNYAQMILPHGVVSVPGWNAY 927
            VYP+V SPT+PGQQSY GG TNW LSRASF+PS RWQ PS+YA ++LP GVVSVPGWNAY
Sbjct: 179  VYPSVPSPTTPGQQSYAGGITNWPLSRASFIPSPRWQAPSSYAPLMLPQGVVSVPGWNAY 238

Query: 928  RXXXXXXXXXXXXXXVAGNNQTYGTSRQSETANEPLQGTYSSYRTGSVPTGYYALPREDV 1107
                             GNNQ YGTSRQSE  N   QGT+S YR+GSVP G+YAL RE+V
Sbjct: 239  --SGQLGSPSESQQQTGGNNQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENV 296

Query: 1108 FPERPGQPDCQFYMKTGDCKFGAVCRFHHPRDRVTPMPDCVLSPIGLPLRPGEPLCIFYS 1287
            FPERPGQP+CQFYMKTGDCKFGAVCRFHHPR+R+ P PDCVLSPIGLPLRPGEPLCIFYS
Sbjct: 297  FPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYS 356

Query: 1288 RYGICKFGPSCKFDHPMGVFTYNFS-PTSADAPADRHLLASSSGSVALNITSKGPIEGAT 1464
            RYGICKFGPSCKFDHPMG+F YN S  +SADAP  R LL SSSGS AL ++S G +E  +
Sbjct: 357  RYGICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRRLLGSSSGSAALTLSSDGLVEAGS 416

Query: 1465 VNSRPITLSERRHMPSSDNSTD 1530
               R ++L E R MP  D++ D
Sbjct: 417  TKPRRLSLPETRQMPPGDDNID 438


>ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223548588|gb|EEF50079.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 448

 Score =  666 bits (1718), Expect = 0.0
 Identities = 314/449 (69%), Positives = 356/449 (79%), Gaps = 8/449 (1%)
 Frame = +1

Query: 208  MDFDTGITMSR-------PPVTAQVSSSLSPPLDEDALWQLNLRSREGMESGPYPVREGE 366
            MDFD GI MSR       PP+      SLS  L+EDA+WQ+NLRS E M+SGPYP   GE
Sbjct: 1    MDFDAGIPMSRTAPPPPPPPLPVTEDPSLSASLNEDAMWQMNLRSSETMDSGPYPEHPGE 60

Query: 367  TDCSYYIRTGLCRFGATCRFNHPPNRKLAIATAKMRGEYPERAGQPECQYYLKTGACKFG 546
             DCSYYIRTGLCRFGATCRFNHPPNRKLAIA A+M+GE+PER GQPECQYYLKTG CKFG
Sbjct: 61   PDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFG 120

Query: 547  ATCKFHHPRDKAGMAGQVLLNALGYPLHPDEAECAYYLRTGQCKFGNTCKFHHPQPSNMM 726
            ATCKFHHP+DKAG+AG+V LN LGYPL P+E ECAYYLRTGQCKFG+TCKFHHPQP+N+M
Sbjct: 121  ATCKFHHPKDKAGIAGRVSLNILGYPLRPNEIECAYYLRTGQCKFGSTCKFHHPQPTNVM 180

Query: 727  VTFGGSPVYPAVQSPTSPGQQSYPGGTTNWSLSRASFVPSARWQGPSNYAQMILPHGVVS 906
            V   GSPVYP VQSPT+PGQQSY GG TNW  SRASF+ S RWQ PS+Y  +ILP GVVS
Sbjct: 181  VPLRGSPVYPTVQSPTTPGQQSYTGGVTNW--SRASFITSPRWQAPSSYTPLILPQGVVS 238

Query: 907  VPGWNAYRXXXXXXXXXXXXXXVAGNNQTYGTSRQSETANEPLQGTYSSYRTGSVPTGYY 1086
            VPGWNAY                 GN+Q YGTSRQSE+ N   QGT S  R GS+P G+Y
Sbjct: 239  VPGWNAYSGQLGSVSSPEGQQQ-TGNSQIYGTSRQSESVNTGSQGTLSPLRAGSMPVGFY 297

Query: 1087 ALPREDVFPERPGQPDCQFYMKTGDCKFGAVCRFHHPRDRVTPMPDCVLSPIGLPLRPGE 1266
            AL R++VFPERPGQP+CQFYMKTGDCKFGAVCRFHHPR+R+ P PDCVLSPIGLPLRPGE
Sbjct: 298  ALQRDNVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGE 357

Query: 1267 PLCIFYSRYGICKFGPSCKFDHPMGVFTYNFS-PTSADAPADRHLLASSSGSVALNITSK 1443
            PLCIFYSRYG+CKFGPSCKFDHPMG+FTYN S P+SADAP  R LL SSSGS AL ++++
Sbjct: 358  PLCIFYSRYGVCKFGPSCKFDHPMGIFTYNLSAPSSADAPV-RRLLGSSSGSAALTLSTE 416

Query: 1444 GPIEGATVNSRPITLSERRHMPSSDNSTD 1530
            G ++  +   R ++LSE R MPS D++ D
Sbjct: 417  GLVDAGSTKPRRLSLSEPRQMPSGDDNID 445


>ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
            isoform 2 [Glycine max]
          Length = 426

 Score =  647 bits (1668), Expect = 0.0
 Identities = 304/442 (68%), Positives = 351/442 (79%), Gaps = 1/442 (0%)
 Frame = +1

Query: 208  MDFDTGITMSRPPVTAQVSSSLSPPLDEDALWQLNLRSREGMESGPYPVREGETDCSYYI 387
            M+FD  I +SR  +         PP   DA+WQ+NLRS E MESGPYP   GE DCSYYI
Sbjct: 1    MEFDAAIPVSREHL---------PP---DAMWQINLRSSETMESGPYPEHPGEPDCSYYI 48

Query: 388  RTGLCRFGATCRFNHPPNRKLAIATAKMRGEYPERAGQPECQYYLKTGACKFGATCKFHH 567
            RTGLCRFGATCRFNHPPNRKLAIA A+M+GE+PER GQPECQYYLKTG CKFGATC+FHH
Sbjct: 49   RTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCRFHH 108

Query: 568  PRDKAGMAGQVLLNALGYPLHPDEAECAYYLRTGQCKFGNTCKFHHPQPSNMMVTFGGSP 747
            PRDKAG+AG+V +N LGYPL P+E ECAYYLRTGQCKFGNTCKFHHPQP+NM+++   SP
Sbjct: 109  PRDKAGIAGRVAMNILGYPLRPNEPECAYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSP 168

Query: 748  VYPAVQSPTSPGQQSYPGGTTNWSLSRASFVPSARWQGPSNYAQMILPHGVVSVPGWNAY 927
            VYP V SPT+PGQQSY  G TNWS S  S++PS RWQGPS+YA +ILP G+VSVPGW+AY
Sbjct: 169  VYPTVHSPTTPGQQSYATGITNWSSS--SYIPSPRWQGPSSYAPLILPQGMVSVPGWSAY 226

Query: 928  RXXXXXXXXXXXXXXVAGNNQTYGTSRQSETANEPLQGTYSSYRTGSVPTGYYALPREDV 1107
                             GN Q+YGTSRQSE AN   QG YS +R+GSVP G+YAL RE++
Sbjct: 227  ----SGQMGSDSPQQTMGNGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENI 282

Query: 1108 FPERPGQPDCQFYMKTGDCKFGAVCRFHHPRDRVTPMPDCVLSPIGLPLRPGEPLCIFYS 1287
            FPERP QP+CQFYMKTGDCKFGAVCRFHHPR+R+ P PDCVLSPIGLPLRPGEPLC+FYS
Sbjct: 283  FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERMIPAPDCVLSPIGLPLRPGEPLCVFYS 342

Query: 1288 RYGICKFGPSCKFDHPMGVFTYNFSPT-SADAPADRHLLASSSGSVALNITSKGPIEGAT 1464
            RYGICKFGPSCKFDHPMGVFTYN S + SADAP  R +L SSSG+ ALN++S+G +E  +
Sbjct: 343  RYGICKFGPSCKFDHPMGVFTYNISASPSADAPG-RRMLGSSSGTSALNLSSEGLVESGS 401

Query: 1465 VNSRPITLSERRHMPSSDNSTD 1530
             N R ++LSE R +PS D++ D
Sbjct: 402  ANPRRLSLSETRQIPSGDDNID 423


>ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
            isoform 1 [Glycine max]
          Length = 428

 Score =  643 bits (1658), Expect = 0.0
 Identities = 296/414 (71%), Positives = 340/414 (82%), Gaps = 1/414 (0%)
 Frame = +1

Query: 292  DALWQLNLRSREGMESGPYPVREGETDCSYYIRTGLCRFGATCRFNHPPNRKLAIATAKM 471
            DA+WQ+NLRS E MESGPYP   GE DCSYYIRTGLCRFGATCRFNHPPNRKLAIA A+M
Sbjct: 19   DAMWQINLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARM 78

Query: 472  RGEYPERAGQPECQYYLKTGACKFGATCKFHHPRDKAGMAGQVLLNALGYPLHPDEAECA 651
            +GE+PER GQPECQYYLKTG CKFGATC+FHHPRDKAG+AG+V +N LGYPL P+E ECA
Sbjct: 79   KGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVAMNILGYPLRPNEPECA 138

Query: 652  YYLRTGQCKFGNTCKFHHPQPSNMMVTFGGSPVYPAVQSPTSPGQQSYPGGTTNWSLSRA 831
            YYLRTGQCKFGNTCKFHHPQP+NM+++   SPVYP V SPT+PGQQSY  G TNWS S  
Sbjct: 139  YYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPTVHSPTTPGQQSYATGITNWSSS-- 196

Query: 832  SFVPSARWQGPSNYAQMILPHGVVSVPGWNAYRXXXXXXXXXXXXXXVAGNNQTYGTSRQ 1011
            S++PS RWQGPS+YA +ILP G+VSVPGW+AY                 GN Q+YGTSRQ
Sbjct: 197  SYIPSPRWQGPSSYAPLILPQGMVSVPGWSAY----SGQMGSDSPQQTMGNGQSYGTSRQ 252

Query: 1012 SETANEPLQGTYSSYRTGSVPTGYYALPREDVFPERPGQPDCQFYMKTGDCKFGAVCRFH 1191
            SE AN   QG YS +R+GSVP G+YAL RE++FPERP QP+CQFYMKTGDCKFGAVCRFH
Sbjct: 253  SEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFH 312

Query: 1192 HPRDRVTPMPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGVFTYNFSPT- 1368
            HPR+R+ P PDCVLSPIGLPLRPGEPLC+FYSRYGICKFGPSCKFDHPMGVFTYN S + 
Sbjct: 313  HPRERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGVFTYNISASP 372

Query: 1369 SADAPADRHLLASSSGSVALNITSKGPIEGATVNSRPITLSERRHMPSSDNSTD 1530
            SADAP  R +L SSSG+ ALN++S+G +E  + N R ++LSE R +PS D++ D
Sbjct: 373  SADAPG-RRMLGSSSGTSALNLSSEGLVESGSANPRRLSLSETRQIPSGDDNID 425


>ref|XP_002328972.1| predicted protein [Populus trichocarpa] gi|222839206|gb|EEE77557.1|
            predicted protein [Populus trichocarpa]
          Length = 425

 Score =  638 bits (1646), Expect = e-180
 Identities = 302/423 (71%), Positives = 338/423 (79%), Gaps = 3/423 (0%)
 Frame = +1

Query: 271  LSPPLD-EDALWQLNLRSREGMESGPYPVREGETDCSYYIRTGLCRFGATCRFNHPPNRK 447
            LS P+   DA+WQ+NLRS E ME+GPYP R GE DCSYYIRTGLCRFGATCRFNHPPNRK
Sbjct: 4    LSYPVSFSDAMWQMNLRSSETMEAGPYPERPGEPDCSYYIRTGLCRFGATCRFNHPPNRK 63

Query: 448  LAIATAKMRGEYPERAGQPECQYYLKTGACKFGATCKFHHPRDKAGMAGQVLLNALGYPL 627
            LAIA A+M+GE+PER GQPECQYYLKTG CKFGATCKFHHPRDKAG++G+V LN LGYPL
Sbjct: 64   LAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGISGRVSLNILGYPL 123

Query: 628  HPDEAECAYYLRTGQCKFGNTCKFHHPQPSNMMVTFGGSPVYPAVQSPTSPGQQSYPGG- 804
             P+E ECAYYLRTGQCKFG+TCKFHHPQP+NMMV   GSP+YP V SPT+PGQQSYPGG 
Sbjct: 124  QPNEIECAYYLRTGQCKFGSTCKFHHPQPTNMMVPLRGSPIYPTVSSPTTPGQQSYPGGL 183

Query: 805  TTNWSLSRASFVPSARWQGPSNYAQMILPHGVVSVPGWNAYRXXXXXXXXXXXXXXVAGN 984
             T W  SRASF+ S RWQ PS+Y  +ILP GVVSVPGWNAY                 GN
Sbjct: 184  ATTW--SRASFITSPRWQAPSSYTPLILPQGVVSVPGWNAYSGQLGSVSSPESQQQ-TGN 240

Query: 985  NQTYGTSRQSETANEPLQGTYSSYRTGSVPTGYYALPREDVFPERPGQPDCQFYMKTGDC 1164
            +Q YGTSR SE+ N   QGT+S YR+GS P G+YAL RE VFPERPGQP+CQFYMKTGDC
Sbjct: 241  SQIYGTSRHSESVNAGSQGTFSPYRSGSAPLGFYALQRESVFPERPGQPECQFYMKTGDC 300

Query: 1165 KFGAVCRFHHPRDRVTPMPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGV 1344
            KFGAVCRFHHPR+R+ P PDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGV
Sbjct: 301  KFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGV 360

Query: 1345 FTYNF-SPTSADAPADRHLLASSSGSVALNITSKGPIEGATVNSRPITLSERRHMPSSDN 1521
            FTYN  + +SADAP  R LL SSSGS  L ++S+G +E      R ++LSE R MP  D+
Sbjct: 361  FTYNLTASSSADAPV-RRLLGSSSGSPGLTLSSEGLVEAGPTKPRRLSLSEPRQMPPGDD 419

Query: 1522 STD 1530
            + D
Sbjct: 420  NID 422


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