BLASTX nr result

ID: Atractylodes22_contig00028034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028034
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002876806.1| hypothetical protein ARALYDRAFT_322561 [Arab...    59   4e-07
ref|NP_973399.1| F-box protein [Arabidopsis thaliana] gi|1222136...    57   1e-06

>ref|XP_002876806.1| hypothetical protein ARALYDRAFT_322561 [Arabidopsis lyrata subsp.
           lyrata] gi|297322644|gb|EFH53065.1| hypothetical protein
           ARALYDRAFT_322561 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
 Frame = -1

Query: 235 TQMLSPDTTYACYLVFELPGKCKGLKH-PVKARNLLPKNDSGTTIFYFRSPSLVNLHRDK 59
           T++LSP T Y+ Y+VF+    C GL H PV+    L   +S     YF  P      R+ 
Sbjct: 199 TRLLSPGTRYSAYIVFKTNDGCPGLGHLPVEVGLGLVGQESSKRFIYFVGPRDRRRGRET 258

Query: 58  R---VPEQREDGWMEVMVWEFF 2
           R    PEQREDGWME  + EFF
Sbjct: 259 RDVTKPEQREDGWMEAELGEFF 280


>ref|NP_973399.1| F-box protein [Arabidopsis thaliana]
           gi|122213648|sp|Q3E6P4.1|FB95_ARATH RecName: Full=F-box
           protein At2g02240 gi|330250466|gb|AEC05560.1| F-box
           protein [Arabidopsis thaliana]
          Length = 320

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
 Frame = -1

Query: 232 QMLSPDTTYACYLVFELPGKCKGLKH-PVKARNLLPKNDSGTTIFYFRSPSLVNLHRDKR 56
           ++LSP T Y+ Y+VF+   +C GL H PV+    L   +S     YF  P      R+ R
Sbjct: 203 RVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSKRFIYFIGPRDRRGRRETR 262

Query: 55  ---VPEQREDGWMEVMVWEFF 2
               P+QREDGWME  + EFF
Sbjct: 263 DVTKPDQREDGWMEAELGEFF 283


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