BLASTX nr result
ID: Atractylodes22_contig00028025
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00028025
(984 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22376.3| unnamed protein product [Vitis vinifera] 174 3e-41
emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera] 174 3e-41
ref|XP_002521979.1| pentatricopeptide repeat-containing protein,... 159 1e-36
ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containi... 157 5e-36
ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containi... 156 6e-36
>emb|CBI22376.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 174 bits (441), Expect = 3e-41
Identities = 94/204 (46%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Frame = +1
Query: 385 SCPVKTWPYEPWTRVSSSPRYGRPLQC----RGVCLDRVTESRVIDSWRRNRDEVGFPEG 552
+C KT Y W S R L+C R VC+DRV W R G +
Sbjct: 46 NCNFKTQSYLQWKGDHVSRRNALLLRCIGQERSVCIDRVNGED--QEWSSGRYAFGVEKK 103
Query: 553 PIQKKHQKDESSVPISASRSNFMNNDEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIP 732
++ K S+ S+ +F+ NDE+TNN+ILQ LC +L+ ASRL+ M+RRNQIP
Sbjct: 104 LREQMSSKKYSNSSNSSLDGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIP 163
Query: 733 HFGSCIKLIRGLVKLDYIDRATEVLNCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLL 912
+F SCI LIRGL+KL+ +RAT VL MVMSGG+PDIIT N+++ GLCK + A++LL
Sbjct: 164 YFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELL 223
Query: 913 EDMSLSGCPPDVFSYNTIVYLMIE 984
++MSLSGCPPD +YNTI+ M +
Sbjct: 224 DEMSLSGCPPDAITYNTILRCMFD 247
Score = 67.0 bits (162), Expect = 7e-09
Identities = 40/136 (29%), Positives = 69/136 (50%)
Frame = +1
Query: 562 KKHQKDESSVPISASRSNFMNNDEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFG 741
K+ + +++++ I S+ M + T N +L LC H + ++ M+ +Q P
Sbjct: 317 KQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVV 376
Query: 742 SCIKLIRGLVKLDYIDRATEVLNCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDM 921
+ LI GL K +DRA + MV +PDIIT N ++ LCK + AL LL +
Sbjct: 377 TYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSL 436
Query: 922 SLSGCPPDVFSYNTIV 969
+ + C P + +YN ++
Sbjct: 437 NDTRCSPGLITYNIVI 452
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/114 (27%), Positives = 54/114 (47%)
Frame = +1
Query: 628 DEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFGSCIKLIRGLVKLDYIDRATEVL 807
D T N ++ Y CK + + ++ + P+ + L+ L Y D E+L
Sbjct: 304 DIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEIL 363
Query: 808 NCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDMSLSGCPPDVFSYNTIV 969
M + P ++T NI+I GLCK + A++ + M C PD+ +YNT++
Sbjct: 364 LIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLL 417
>emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]
Length = 550
Score = 174 bits (441), Expect = 3e-41
Identities = 94/204 (46%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Frame = +1
Query: 385 SCPVKTWPYEPWTRVSSSPRYGRPLQC----RGVCLDRVTESRVIDSWRRNRDEVGFPEG 552
+C KT Y W S R L+C R VC+DRV W R G +
Sbjct: 46 NCNFKTQSYLQWKGDHVSRRNALLLRCIGQERSVCIDRVNGED--QEWSSGRYAFGVEKK 103
Query: 553 PIQKKHQKDESSVPISASRSNFMNNDEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIP 732
++ K S+ S+ +F+ NDE+TNN+ILQ LC +L+ ASRL+ M+RRNQIP
Sbjct: 104 LREQMSSKKYSNSSNSSFDGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIP 163
Query: 733 HFGSCIKLIRGLVKLDYIDRATEVLNCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLL 912
+F SCI LIRGL+KL+ +RAT VL MVMSGG+PDIIT N+++ GLCK + A++LL
Sbjct: 164 YFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELL 223
Query: 913 EDMSLSGCPPDVFSYNTIVYLMIE 984
++MSLSGCPPD +YNTI+ M +
Sbjct: 224 DEMSLSGCPPDAITYNTILRCMFD 247
Score = 67.0 bits (162), Expect = 7e-09
Identities = 40/136 (29%), Positives = 69/136 (50%)
Frame = +1
Query: 562 KKHQKDESSVPISASRSNFMNNDEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFG 741
K+ + +++++ I S+ M + T N +L LC H + ++ M+ +Q P
Sbjct: 317 KQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNMTSQPPTVV 376
Query: 742 SCIKLIRGLVKLDYIDRATEVLNCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDM 921
+ LI GL K +DRA + MV +PDIIT N ++ LCK + AL LL +
Sbjct: 377 TYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSL 436
Query: 922 SLSGCPPDVFSYNTIV 969
+ + C P + +YN ++
Sbjct: 437 NDTRCSPGLITYNIVI 452
Score = 60.8 bits (146), Expect = 5e-07
Identities = 32/114 (28%), Positives = 55/114 (48%)
Frame = +1
Query: 628 DEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFGSCIKLIRGLVKLDYIDRATEVL 807
D T N ++ Y CK + + ++ + P+ + L+ L Y D E+L
Sbjct: 304 DIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEIL 363
Query: 808 NCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDMSLSGCPPDVFSYNTIV 969
M M+ P ++T NI+I GLCK + A++ + M C PD+ +YNT++
Sbjct: 364 LIMNMTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLL 417
>ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538783|gb|EEF40383.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 496
Score = 159 bits (402), Expect = 1e-36
Identities = 84/188 (44%), Positives = 121/188 (64%), Gaps = 13/188 (6%)
Frame = +1
Query: 454 PLQCRG----VCLDRV---------TESRVIDSWRRNRDEVGFPEGPIQKKHQKDESSVP 594
PLQC+G V +D+V +E+ V+D R+ R+++ K H +S +
Sbjct: 37 PLQCKGLQKSVSIDKVDKNDHDDWSSETLVLDVGRKFREQMN------TKNHVSPKSYI- 89
Query: 595 ISASRSNFMNNDEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFGSCIKLIRGLVK 774
F+ N+E+ NN+ILQ+LC L+ A RL+ M+RR+QIP+F C LIRG +K
Sbjct: 90 ----EGPFVENEEEINNEILQHLCNKGRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIK 145
Query: 775 LDYIDRATEVLNCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDMSLSGCPPDVFS 954
+D I++A +L MVMSGGVPD+IT N+++ GLCK ++ +A+DLLEDMSLSGCPPDV +
Sbjct: 146 VDQINKAARILKIMVMSGGVPDVITYNMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVT 205
Query: 955 YNTIVYLM 978
YNTI+ M
Sbjct: 206 YNTIIRCM 213
Score = 61.2 bits (147), Expect = 4e-07
Identities = 31/114 (27%), Positives = 54/114 (47%)
Frame = +1
Query: 628 DEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFGSCIKLIRGLVKLDYIDRATEVL 807
D T N ++ + CK + A+ ++ M P+ + L+ L D E+L
Sbjct: 272 DLVTYNSLVNFTCKQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEIL 331
Query: 808 NCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDMSLSGCPPDVFSYNTIV 969
M + P ++T N +I GLCK+ ++ A+D M C PD+ +YNT++
Sbjct: 332 TVMKETSHPPTVVTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLL 385
>ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Vitis vinifera]
Length = 498
Score = 157 bits (396), Expect = 5e-36
Identities = 73/124 (58%), Positives = 97/124 (78%)
Frame = +1
Query: 613 NFMNNDEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFGSCIKLIRGLVKLDYIDR 792
+F+ NDE+TNN+ILQ LC +L+ ASRL+ M+RRNQIP+F SCI LIRGL+KL+ +R
Sbjct: 33 SFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTER 92
Query: 793 ATEVLNCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDMSLSGCPPDVFSYNTIVY 972
AT VL MVMSGG+PDIIT N+++ GLCK + A++LL++MSLSGCPPD +YNTI+
Sbjct: 93 ATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILR 152
Query: 973 LMIE 984
M +
Sbjct: 153 CMFD 156
Score = 67.0 bits (162), Expect = 7e-09
Identities = 40/136 (29%), Positives = 69/136 (50%)
Frame = +1
Query: 562 KKHQKDESSVPISASRSNFMNNDEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFG 741
K+ + +++++ I S+ M + T N +L LC H + ++ M+ +Q P
Sbjct: 226 KQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVV 285
Query: 742 SCIKLIRGLVKLDYIDRATEVLNCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDM 921
+ LI GL K +DRA + MV +PDIIT N ++ LCK + AL LL +
Sbjct: 286 TYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSL 345
Query: 922 SLSGCPPDVFSYNTIV 969
+ + C P + +YN ++
Sbjct: 346 NDTRCSPGLITYNIVI 361
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/114 (27%), Positives = 54/114 (47%)
Frame = +1
Query: 628 DEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFGSCIKLIRGLVKLDYIDRATEVL 807
D T N ++ Y CK + + ++ + P+ + L+ L Y D E+L
Sbjct: 213 DIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEIL 272
Query: 808 NCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDMSLSGCPPDVFSYNTIV 969
M + P ++T NI+I GLCK + A++ + M C PD+ +YNT++
Sbjct: 273 LIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLL 326
>ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 156 bits (395), Expect = 6e-36
Identities = 86/191 (45%), Positives = 116/191 (60%), Gaps = 7/191 (3%)
Frame = +1
Query: 433 SSPRYGRP---LQCRG----VCLDRVTESRVIDSWRRNRDEVGFPEGPIQKKHQKDESSV 591
S+ +Y P L+CR V +DR E D W D VG + K +
Sbjct: 58 STTKYSIPWKGLRCRSFQRSVLIDRANEVDHED-WCFGSDYVGERRNSRELLDSKKSVNS 116
Query: 592 PISASRSNFMNNDEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFGSCIKLIRGLV 771
P + + F+ NDE TNN+ILQ LC +L A+RL+ M+R++QIPHF SC LIRG +
Sbjct: 117 PTLSPEAPFVQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFI 176
Query: 772 KLDYIDRATEVLNCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDMSLSGCPPDVF 951
+ +D A + LN MVMSGGVPD IT N++I GLCKN R+ +ALDL+EDMSLSGC PD
Sbjct: 177 RKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAI 236
Query: 952 SYNTIVYLMIE 984
+YN+I+ + +
Sbjct: 237 TYNSIIRCLFD 247
Score = 57.0 bits (136), Expect = 7e-06
Identities = 36/136 (26%), Positives = 65/136 (47%)
Frame = +1
Query: 562 KKHQKDESSVPISASRSNFMNNDEQTNNDILQYLCKHYELLKASRLVAAMSRRNQIPHFG 741
K+ + +++++ I S+ M + T N ++ L H + ++ M+ + P
Sbjct: 317 KQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHV 376
Query: 742 SCIKLIRGLVKLDYIDRATEVLNCMVMSGGVPDIITCNIIIRGLCKNKRIHAALDLLEDM 921
+ L+ GL K +DRA + MV PDIIT N ++ GLCK I + LL +
Sbjct: 377 TYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLL 436
Query: 922 SLSGCPPDVFSYNTIV 969
+ C P + +YN ++
Sbjct: 437 VGTSCSPGLVTYNIVI 452