BLASTX nr result

ID: Atractylodes22_contig00028015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00028015
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40678.1| unknown [Lotus japonicus]                              163   3e-38
ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycin...   160   3e-37
ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protei...   160   3e-37
ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|2...   158   1e-36
ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitoch...   139   7e-31

>gb|AFK40678.1| unknown [Lotus japonicus]
          Length = 187

 Score =  163 bits (413), Expect = 3e-38
 Identities = 92/162 (56%), Positives = 114/162 (70%), Gaps = 6/162 (3%)
 Frame = -3

Query: 671 NFETTTQQCRLSSFLCCTPVNRGPLWRAFSSTLSITSSKPQNCLQVVACVPPSQ------ 510
           N +T TQ   L     C+  N       F S+LS +  + Q    ++AC+PPS       
Sbjct: 30  NSKTQTQTLHLH----CSQTNHRKT--PFPSSLS-SPHRIQGSCYLLACLPPSSESSSSS 82

Query: 509 PQKTTATFTSSTKLYVSGLSFRTSEESLRNAFQPFGQLIEVNLVMDKIANRPRGFAFLRY 330
           P    ++   ST+LYVSGLSFRT+EESLRN F+ FGQL++VNLVMDK+ANRPRGFAFLRY
Sbjct: 83  PSAKPSSSAPSTRLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRY 142

Query: 329 ATKEESEKAIEGMHGKFLDGRVIFVEFAKPRSQLPQGIKQDS 204
           AT+EES+KAIEGMHGKFLDGRVIFVE AKPRS+L Q  +Q++
Sbjct: 143 ATEEESQKAIEGMHGKFLDGRVIFVEVAKPRSELRQRFQQNT 184


>ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
           gi|255625921|gb|ACU13305.1| unknown [Glycine max]
          Length = 180

 Score =  160 bits (405), Expect = 3e-37
 Identities = 89/134 (66%), Positives = 107/134 (79%), Gaps = 4/134 (2%)
 Frame = -3

Query: 590 AFSSTLSITSSKPQNCLQVVACVPP-SQPQKTTA--TFTS-STKLYVSGLSFRTSEESLR 423
           +F S+ SI  +K      V+AC+PP S    +TA  +F S  TKLYVSGLSFRT+EESLR
Sbjct: 48  SFPSSSSILRNKAS--CSVLACLPPESSTSSSTAKPSFPSPQTKLYVSGLSFRTTEESLR 105

Query: 422 NAFQPFGQLIEVNLVMDKIANRPRGFAFLRYATKEESEKAIEGMHGKFLDGRVIFVEFAK 243
           NAF+ FGQL+EV LVMD+IANRPRGFAFLRYAT+EES+KAIEGMHGKFLDGRVIFVE AK
Sbjct: 106 NAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAK 165

Query: 242 PRSQLPQGIKQDSK 201
           PRS+L    ++D++
Sbjct: 166 PRSELAPRKQEDTR 179


>ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|296088019|emb|CBI35302.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  160 bits (405), Expect = 3e-37
 Identities = 84/113 (74%), Positives = 93/113 (82%)
 Frame = -3

Query: 548 NCLQVVACVPPSQPQKTTATFTSSTKLYVSGLSFRTSEESLRNAFQPFGQLIEVNLVMDK 369
           N L  VAC+P S  Q +       T+LYVSGLSFRT+EESLRNAF+ FGQL+EVNLVMDK
Sbjct: 59  NDLFAVACLPSSPNQPSIP----KTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDK 114

Query: 368 IANRPRGFAFLRYATKEESEKAIEGMHGKFLDGRVIFVEFAKPRSQLPQGIKQ 210
           IANRPRGFAFLRY+T+EESEKAIEGMHGKFLDGRVIFVE AKPRS+L Q   Q
Sbjct: 115 IANRPRGFAFLRYSTEEESEKAIEGMHGKFLDGRVIFVEVAKPRSELRQNQNQ 167


>ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|222859004|gb|EEE96551.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  158 bits (399), Expect = 1e-36
 Identities = 79/110 (71%), Positives = 92/110 (83%), Gaps = 1/110 (0%)
 Frame = -3

Query: 548 NCLQVVACVPPSQPQKTTATFT-SSTKLYVSGLSFRTSEESLRNAFQPFGQLIEVNLVMD 372
           +C  V+AC+P S    ++  F    TKLYVSGLSFRT+EESLRNAFQ FGQL++VNLVMD
Sbjct: 65  SCCSVLACLPSSASSPSSFGFNFRKTKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMD 124

Query: 371 KIANRPRGFAFLRYATKEESEKAIEGMHGKFLDGRVIFVEFAKPRSQLPQ 222
           K+A RPRGFAFLRY T+EE++KAIEGMHGKFLDGRVIFVE AKPRS+L Q
Sbjct: 125 KVAKRPRGFAFLRYETEEEAQKAIEGMHGKFLDGRVIFVEVAKPRSELRQ 174


>ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
           sativus]
          Length = 175

 Score =  139 bits (350), Expect = 7e-31
 Identities = 75/122 (61%), Positives = 94/122 (77%), Gaps = 1/122 (0%)
 Frame = -3

Query: 566 TSSKPQNCLQVVACVPPSQPQKTTAT-FTSSTKLYVSGLSFRTSEESLRNAFQPFGQLIE 390
           T S   + L  VACV  S    ++   +T ST+LY+SGLSFRT+EESLRNAF+ FGQL+E
Sbjct: 58  TQSISDSLLFSVACVSSSPSSSSSPRRYTPSTRLYISGLSFRTTEESLRNAFKSFGQLVE 117

Query: 389 VNLVMDKIANRPRGFAFLRYATKEESEKAIEGMHGKFLDGRVIFVEFAKPRSQLPQGIKQ 210
           VNLVMD++ANRPRGFAFLRYA++EES+KAIEGMHGK       FVE AK RS+L QG+++
Sbjct: 118 VNLVMDRLANRPRGFAFLRYASEEESQKAIEGMHGK-----GDFVEVAKSRSELRQGLEE 172

Query: 209 DS 204
           +S
Sbjct: 173 NS 174


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