BLASTX nr result

ID: Atractylodes22_contig00027976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027976
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vi...    59   5e-07
emb|CBI39868.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|NP_001234642.1| uncharacterized protein LOC778198 [Solanum l...    58   7e-07
ref|XP_004156394.1| PREDICTED: F-box protein At-B-like [Cucumis ...    57   2e-06
ref|XP_004139848.1| PREDICTED: F-box protein At-B-like [Cucumis ...    55   8e-06

>ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vinifera]
          Length = 619

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = -1

Query: 265 QTFDGITRRFGKIENITLNCLRLNDSSIASIIGPGVEELSLLKCPPLSYESMVAIIRTCP 86
           QT + +  R   ++ +TL+CLRL+DSSI   +GP ++EL+LL+C  LSY+ + +I  + P
Sbjct: 72  QTLNHLVSRCKGLKILTLDCLRLDDSSITIFLGPHIQELNLLRCSLLSYQLLRSIGESLP 131

Query: 85  NLR 77
           NLR
Sbjct: 132 NLR 134


>emb|CBI39868.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = -1

Query: 265 QTFDGITRRFGKIENITLNCLRLNDSSIASIIGPGVEELSLLKCPPLSYESMVAIIRTCP 86
           QT + +  R   ++ +TL+CLRL+DSSI   +GP ++EL+LL+C  LSY+ + +I  + P
Sbjct: 60  QTLNHLVSRCKGLKILTLDCLRLDDSSITIFLGPHIQELNLLRCSLLSYQLLRSIGESLP 119

Query: 85  NLR 77
           NLR
Sbjct: 120 NLR 122


>ref|NP_001234642.1| uncharacterized protein LOC778198 [Solanum lycopersicum]
           gi|13620218|emb|CAC36396.1| hypothetical protein
           [Solanum lycopersicum] gi|13620225|emb|CAC36400.1|
           hypothetical protein [Solanum lycopersicum]
          Length = 607

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = -1

Query: 265 QTFDGITRRFGKIENITLNCLRL-NDSSIASIIGPGVEELSLLKCPPLSYESMVAIIRTC 89
           +T + + RR    +++T++CL+L N +SI +I+G  +EELSLLKC  +SY  + AI   C
Sbjct: 81  ETLEQVARRVQGAKSLTIDCLQLKNGTSIFNILGEHIEELSLLKCSRVSYHILSAIRERC 140

Query: 88  PNLR 77
           PNLR
Sbjct: 141 PNLR 144


>ref|XP_004156394.1| PREDICTED: F-box protein At-B-like [Cucumis sativus]
          Length = 339

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/59 (45%), Positives = 38/59 (64%)
 Frame = -1

Query: 253 GITRRFGKIENITLNCLRLNDSSIASIIGPGVEELSLLKCPPLSYESMVAIIRTCPNLR 77
           GI  R   + ++T+NCLRL+DSS+    GP + EL+L  C  LSY+ +  I + CPNLR
Sbjct: 68  GILGRCRGMSSLTVNCLRLHDSSLVDFFGPHLLELNLFCCSLLSYQFLAVIGKLCPNLR 126


>ref|XP_004139848.1| PREDICTED: F-box protein At-B-like [Cucumis sativus]
          Length = 339

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/59 (44%), Positives = 37/59 (62%)
 Frame = -1

Query: 253 GITRRFGKIENITLNCLRLNDSSIASIIGPGVEELSLLKCPPLSYESMVAIIRTCPNLR 77
           GI  R   + ++T+NCLRL+DSS+    GP + EL+L  C  LSY+ +    + CPNLR
Sbjct: 68  GILGRCRGMSSLTVNCLRLHDSSLVDFFGPHLLELNLFCCSLLSYQFLAVTGKLCPNLR 126


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