BLASTX nr result

ID: Atractylodes22_contig00027871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027871
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259...    40   2e-06
ref|XP_002312427.1| predicted protein [Populus trichocarpa] gi|2...    40   2e-06
ref|XP_004150858.1| PREDICTED: uncharacterized protein LOC101213...    40   5e-06
ref|XP_002534507.1| membrane associated ring finger 1,8, putativ...    40   8e-06

>ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259487 [Vitis vinifera]
          Length = 240

 Score = 39.7 bits (91), Expect(2) = 2e-06
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 654 DSNMETPCSCCGSLKF 701
           DSNMETPCSCCGSLK+
Sbjct: 71  DSNMETPCSCCGSLKY 86



 Score = 38.5 bits (88), Expect(2) = 2e-06
 Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 17/60 (28%)
 Frame = +1

Query: 523 MGDRFVFLVDRLPTESTLEASAPAN------------DTGID-----MDPEAVYSPRKLV 651
           MGD FV LVDRL TESTLEA+  +             DT +D     MD +   SPRKLV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRNRLMQASVSAIADTKVDCKSHKMDFKHGSSPRKLV 60


>ref|XP_002312427.1| predicted protein [Populus trichocarpa] gi|222852247|gb|EEE89794.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 40.0 bits (92), Expect(2) = 2e-06
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +3

Query: 654 DSNMETPCSCCGSLKFM 704
           DSNMETPCSCCGSLK++
Sbjct: 71  DSNMETPCSCCGSLKYV 87



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 17/60 (28%)
 Frame = +1

Query: 523 MGDRFVFLVDRLPTESTLEA------------SAPANDTGID-----MDPEAVYSPRKLV 651
           MGD FV LV+RL TESTLEA            ++  +DT ID     MD   + +PRKLV
Sbjct: 1   MGDHFVLLVNRLLTESTLEAAIESRNLSMQATASTVDDTKIDKSFQKMDFGDISTPRKLV 60


>ref|XP_004150858.1| PREDICTED: uncharacterized protein LOC101213226 [Cucumis sativus]
           gi|449523283|ref|XP_004168653.1| PREDICTED:
           uncharacterized LOC101213226 [Cucumis sativus]
          Length = 271

 Score = 39.7 bits (91), Expect(2) = 5e-06
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 654 DSNMETPCSCCGSLKF 701
           DSNMETPCSCCGSLK+
Sbjct: 71  DSNMETPCSCCGSLKY 86



 Score = 37.0 bits (84), Expect(2) = 5e-06
 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 17/60 (28%)
 Frame = +1

Query: 523 MGDRFVFLVDRLPTESTLEASAPA-----------------NDTGIDMDPEAVYSPRKLV 651
           MGD FV LVDRL TESTLEA+  +                 + +  DM  + V SP+K+V
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRKPSTEATSSAMDGLKRDKSSTDMGFDNVQSPKKIV 60


>ref|XP_002534507.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223525156|gb|EEF27877.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 242

 Score = 39.7 bits (91), Expect(2) = 8e-06
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 654 DSNMETPCSCCGSLKF 701
           DSNMETPCSCCGSLK+
Sbjct: 71  DSNMETPCSCCGSLKY 86



 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 19/36 (52%), Positives = 23/36 (63%)
 Frame = +1

Query: 523 MGDRFVFLVDRLPTESTLEASAPANDTGIDMDPEAV 630
           MGD FV LVDRL TESTLEA+  + +  +     AV
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAITSRNQLLQATESAV 36