BLASTX nr result
ID: Atractylodes22_contig00027871
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00027871 (766 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259... 40 2e-06 ref|XP_002312427.1| predicted protein [Populus trichocarpa] gi|2... 40 2e-06 ref|XP_004150858.1| PREDICTED: uncharacterized protein LOC101213... 40 5e-06 ref|XP_002534507.1| membrane associated ring finger 1,8, putativ... 40 8e-06 >ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259487 [Vitis vinifera] Length = 240 Score = 39.7 bits (91), Expect(2) = 2e-06 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +3 Query: 654 DSNMETPCSCCGSLKF 701 DSNMETPCSCCGSLK+ Sbjct: 71 DSNMETPCSCCGSLKY 86 Score = 38.5 bits (88), Expect(2) = 2e-06 Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 17/60 (28%) Frame = +1 Query: 523 MGDRFVFLVDRLPTESTLEASAPAN------------DTGID-----MDPEAVYSPRKLV 651 MGD FV LVDRL TESTLEA+ + DT +D MD + SPRKLV Sbjct: 1 MGDHFVLLVDRLLTESTLEAAIESRNRLMQASVSAIADTKVDCKSHKMDFKHGSSPRKLV 60 >ref|XP_002312427.1| predicted protein [Populus trichocarpa] gi|222852247|gb|EEE89794.1| predicted protein [Populus trichocarpa] Length = 233 Score = 40.0 bits (92), Expect(2) = 2e-06 Identities = 15/17 (88%), Positives = 17/17 (100%) Frame = +3 Query: 654 DSNMETPCSCCGSLKFM 704 DSNMETPCSCCGSLK++ Sbjct: 71 DSNMETPCSCCGSLKYV 87 Score = 37.7 bits (86), Expect(2) = 2e-06 Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 17/60 (28%) Frame = +1 Query: 523 MGDRFVFLVDRLPTESTLEA------------SAPANDTGID-----MDPEAVYSPRKLV 651 MGD FV LV+RL TESTLEA ++ +DT ID MD + +PRKLV Sbjct: 1 MGDHFVLLVNRLLTESTLEAAIESRNLSMQATASTVDDTKIDKSFQKMDFGDISTPRKLV 60 >ref|XP_004150858.1| PREDICTED: uncharacterized protein LOC101213226 [Cucumis sativus] gi|449523283|ref|XP_004168653.1| PREDICTED: uncharacterized LOC101213226 [Cucumis sativus] Length = 271 Score = 39.7 bits (91), Expect(2) = 5e-06 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +3 Query: 654 DSNMETPCSCCGSLKF 701 DSNMETPCSCCGSLK+ Sbjct: 71 DSNMETPCSCCGSLKY 86 Score = 37.0 bits (84), Expect(2) = 5e-06 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 17/60 (28%) Frame = +1 Query: 523 MGDRFVFLVDRLPTESTLEASAPA-----------------NDTGIDMDPEAVYSPRKLV 651 MGD FV LVDRL TESTLEA+ + + + DM + V SP+K+V Sbjct: 1 MGDHFVLLVDRLLTESTLEAAIESRKPSTEATSSAMDGLKRDKSSTDMGFDNVQSPKKIV 60 >ref|XP_002534507.1| membrane associated ring finger 1,8, putative [Ricinus communis] gi|223525156|gb|EEF27877.1| membrane associated ring finger 1,8, putative [Ricinus communis] Length = 242 Score = 39.7 bits (91), Expect(2) = 8e-06 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +3 Query: 654 DSNMETPCSCCGSLKF 701 DSNMETPCSCCGSLK+ Sbjct: 71 DSNMETPCSCCGSLKY 86 Score = 36.2 bits (82), Expect(2) = 8e-06 Identities = 19/36 (52%), Positives = 23/36 (63%) Frame = +1 Query: 523 MGDRFVFLVDRLPTESTLEASAPANDTGIDMDPEAV 630 MGD FV LVDRL TESTLEA+ + + + AV Sbjct: 1 MGDHFVLLVDRLLTESTLEAAITSRNQLLQATESAV 36