BLASTX nr result

ID: Atractylodes22_contig00027855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027855
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]    66   3e-09
emb|CAD39360.2| OSJNBa0059H15.11 [Oryza sativa Japonica Group]         60   2e-07
gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-...    59   4e-07
emb|CAH67143.1| OSIGBa0130P02.7 [Oryza sativa Indica Group]            59   4e-07
emb|CAH67760.1| H0124E07.7 [Oryza sativa Indica Group]                 59   4e-07

>emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]
          Length = 1797

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
 Frame = +2

Query: 8    PCDTMLGNCYRCHEPGHMAKDCT--------KPKVDQSKDKGKQQTTSARVFTMPVDKSA 163
            PC   +G C+ C E GH+ +DC         KPK +  KDK K +     VF M    + 
Sbjct: 726  PCYREIGACFCCGEQGHLIRDCPENRKFITGKPKEENKKDKQKPKA-QGWVFAMTHRDA- 783

Query: 164  TVDQSKVAEKSTAGMISGTLLIDDKSVYVLFDTGATHSVVSEKLESFLKPYVKSTEYPVV 343
                     ++T+ +++GTL I      VL D G+THS VS      L   V S ++ ++
Sbjct: 784  ---------QATSDVVTGTLRIHTLFARVLIDLGSTHSFVSVSFAGLLGLPVASMDFDLI 834

Query: 344  ISTPLGKSV 370
            ++TP+G SV
Sbjct: 835  VATPVGDSV 843


>emb|CAD39360.2| OSJNBa0059H15.11 [Oryza sativa Japonica Group]
          Length = 585

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
 Frame = +2

Query: 32  CYRCHEPGHMAKDCTKPKVDQSKDKGKQQTTSARVFTMPVDKSATVDQSKVAEKSTAG-- 205
           C+ C EPGH A  C KP+               RV  +PV  ++TV  SK      A   
Sbjct: 270 CFNCGEPGHYADKCPKPR---------------RVKVVPVQSNSTVPASKARVNHVAAAE 314

Query: 206 ------MISGTLLIDDKSVYVLFDTGATHSVVSEKLESFLKPYVKSTEYPVVISTPLGKS 367
                 +I GT L++     VLFD+GATHS +S          V+    P+++STP  ++
Sbjct: 315 AQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPMMVSTPSNQA 374

Query: 368 V 370
           +
Sbjct: 375 L 375


>gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550403|gb|ABA93200.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1640

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
 Frame = +2

Query: 23  LGNCYRCHEPGHMAKDCTKPKVDQSKDKGKQQTTSARVFTMPVDKSATVDQSKVAEKSTA 202
           LG C+ C +PGH A  C KP+    K+   Q  ++A     P  K A V+   VAE   A
Sbjct: 630 LGVCFNCGDPGHYADKCPKPRC--VKNAPVQNNSNA-----PAPK-ARVNHVAVAEAQNA 681

Query: 203 -GMISGTLLIDDKSVYVLFDTGATHSVVSEKLESFLKPYVKSTEYPVVISTP 355
             ++ GT  ++    +VLFD+GATHS +S+   S     V S   P++++TP
Sbjct: 682 PDVVLGTFPVNSIPAFVLFDSGATHSFLSKSFASNHGMEVISLGRPLLVNTP 733


>emb|CAH67143.1| OSIGBa0130P02.7 [Oryza sativa Indica Group]
          Length = 1741

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
 Frame = +2

Query: 32  CYRCHEPGHMAKDCTKPKVDQSKDKGKQQTTSARVFTMPVDKSATVDQSKVAEKSTAG-- 205
           C+ C +PGH A  C KP+               RV  +P   ++TV  SK      A   
Sbjct: 580 CFNCGDPGHYADKCPKPR---------------RVKVVPAQSNSTVPASKARVNHVAAAE 624

Query: 206 ------MISGTLLIDDKSVYVLFDTGATHSVVSEKLESFLKPYVKSTEYPVVISTPLGKS 367
                 +I GT L++     VLFD+GATHS +S       +  V+    P++ISTP  ++
Sbjct: 625 AQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHEMEVEDLRRPLMISTPSNQA 684

Query: 368 V 370
           +
Sbjct: 685 L 685


>emb|CAH67760.1| H0124E07.7 [Oryza sativa Indica Group]
          Length = 1430

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
 Frame = +2

Query: 32  CYRCHEPGHMAKDCTKPKVDQSKDKGKQQTTSARVFTMPVDKSATVDQSKVAEKSTAG-- 205
           C+ C +PGH A  C KP+               RV  +P   ++TV  SKV     A   
Sbjct: 311 CFNCGDPGHYADKCPKPR---------------RVKVVPAQSNSTVPASKVRVNHVAAAE 355

Query: 206 ------MISGTLLIDDKSVYVLFDTGATHSVVSEKLESFLKPYVKSTEYPVVISTPLGKS 367
                 +I GT L++     VLFD+GATHS +S          V+    P+++STP  ++
Sbjct: 356 AQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQA 415

Query: 368 V 370
           +
Sbjct: 416 L 416


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