BLASTX nr result

ID: Atractylodes22_contig00027803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027803
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi...   408   e-112
emb|CBI38763.3| unnamed protein product [Vitis vinifera]              408   e-112
emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]   408   e-112
ref|XP_002302563.1| predicted protein [Populus trichocarpa] gi|2...   398   e-109
ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containi...   381   e-103

>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Vitis vinifera]
          Length = 786

 Score =  408 bits (1049), Expect = e-112
 Identities = 185/252 (73%), Positives = 223/252 (88%)
 Frame = +3

Query: 3    RQYFDSMVNAYHIKPGPDHYACMIDLLGRSGKISEAEELLNDMVVEPDATVWKALLSACR 182
            R YF SM   Y IKPGP+HYACMIDLLGRSGK+ EA+ELLN M V+PDATVWKALL+ACR
Sbjct: 535  RSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACR 594

Query: 183  VHGKLELAEKAANILFELEPQDAVPYIMLSNLYSSVGKWDDAARIRRLMKSRGVNKEPGY 362
            VHG +EL E+AAN LFELEP++AVPY++LSNLYS+ GKW++AA+ RRLMK RGV+KEPG 
Sbjct: 595  VHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGC 654

Query: 363  SWMEINSQVHSFMSEDRSHEKSNVIYSKINEVMMLIREAGYIPDMNFALHNIDEEGKELG 542
            SW+E++S+VH FMSEDRSH ++  IYSK++E+M+LI+EAGY+PDMNFALH++DEEGKELG
Sbjct: 655  SWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELG 714

Query: 543  LAYHSEKLAVAFGLLELPQGTPIRIYKNLRVCGDCHTAMKFISSVYSRTIILRDSNRFHH 722
            LAYHSEKLAVAFGLL +P G PIRI+KNLR+CGDCHTAMK++S V+ R +ILRDSN FHH
Sbjct: 715  LAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHH 774

Query: 723  FKEGVCSCGDYW 758
            F+EG CSC DYW
Sbjct: 775  FREGACSCSDYW 786


>emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  408 bits (1049), Expect = e-112
 Identities = 185/252 (73%), Positives = 223/252 (88%)
 Frame = +3

Query: 3    RQYFDSMVNAYHIKPGPDHYACMIDLLGRSGKISEAEELLNDMVVEPDATVWKALLSACR 182
            R YF SM   Y IKPGP+HYACMIDLLGRSGK+ EA+ELLN M V+PDATVWKALL+ACR
Sbjct: 468  RDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACR 527

Query: 183  VHGKLELAEKAANILFELEPQDAVPYIMLSNLYSSVGKWDDAARIRRLMKSRGVNKEPGY 362
            VHG +EL E+AAN LFELEP++AVPY++LSNLYS+ GKW++AA+ RRLMK RGV+KEPG 
Sbjct: 528  VHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGC 587

Query: 363  SWMEINSQVHSFMSEDRSHEKSNVIYSKINEVMMLIREAGYIPDMNFALHNIDEEGKELG 542
            SW+E++S+VH FMSEDRSH ++  IYSK++E+M+LI+EAGY+PDMNFALH++DEEGKELG
Sbjct: 588  SWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELG 647

Query: 543  LAYHSEKLAVAFGLLELPQGTPIRIYKNLRVCGDCHTAMKFISSVYSRTIILRDSNRFHH 722
            LAYHSEKLAVAFGLL +P G PIRI+KNLR+CGDCHTAMK++S V+ R +ILRDSN FHH
Sbjct: 648  LAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHH 707

Query: 723  FKEGVCSCGDYW 758
            F+EG CSC DYW
Sbjct: 708  FREGACSCSDYW 719


>emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  408 bits (1049), Expect = e-112
 Identities = 185/252 (73%), Positives = 223/252 (88%)
 Frame = +3

Query: 3   RQYFDSMVNAYHIKPGPDHYACMIDLLGRSGKISEAEELLNDMVVEPDATVWKALLSACR 182
           R YF SM   Y IKPGP+HYACMIDLLGRSGK+ EA+ELLN M V+PDATVWKALL+ACR
Sbjct: 189 RSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACR 248

Query: 183 VHGKLELAEKAANILFELEPQDAVPYIMLSNLYSSVGKWDDAARIRRLMKSRGVNKEPGY 362
           VHG +EL E+AAN LFELEP++AVPY++LSNLYS+ GKW++AA+ RRLMK RGV+KEPG 
Sbjct: 249 VHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGC 308

Query: 363 SWMEINSQVHSFMSEDRSHEKSNVIYSKINEVMMLIREAGYIPDMNFALHNIDEEGKELG 542
           SW+E++S+VH FMSEDRSH ++  IYSK++E+M+LI+EAGY+PDMNFALH++DEEGKELG
Sbjct: 309 SWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELG 368

Query: 543 LAYHSEKLAVAFGLLELPQGTPIRIYKNLRVCGDCHTAMKFISSVYSRTIILRDSNRFHH 722
           LAYHSEKLAVAFGLL +P G PIRI+KNLR+CGDCHTAMK++S V+ R +ILRDSN FHH
Sbjct: 369 LAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHH 428

Query: 723 FKEGVCSCGDYW 758
           F+EG CSC DYW
Sbjct: 429 FREGACSCSDYW 440


>ref|XP_002302563.1| predicted protein [Populus trichocarpa] gi|222844289|gb|EEE81836.1|
            predicted protein [Populus trichocarpa]
          Length = 514

 Score =  398 bits (1023), Expect = e-109
 Identities = 186/252 (73%), Positives = 219/252 (86%)
 Frame = +3

Query: 3    RQYFDSMVNAYHIKPGPDHYACMIDLLGRSGKISEAEELLNDMVVEPDATVWKALLSACR 182
            R YF++M   Y IKPGP+HYACMIDLLGRSGK++EA+ LLN MVV PDA VWKALL+ACR
Sbjct: 263  RAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACR 322

Query: 183  VHGKLELAEKAANILFELEPQDAVPYIMLSNLYSSVGKWDDAARIRRLMKSRGVNKEPGY 362
            VH +LEL E AA  LFELEP +++PY+MLSN+YS+ GKW+DAARIRRLM+SRG+ KEPGY
Sbjct: 323  VHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGY 382

Query: 363  SWMEINSQVHSFMSEDRSHEKSNVIYSKINEVMMLIREAGYIPDMNFALHNIDEEGKELG 542
            SW+E NS+V +FMSEDR+H   N IYSKI+E++MLI+EAGY+PDM+FALH+ D+E KELG
Sbjct: 383  SWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDMSFALHDTDDEVKELG 442

Query: 543  LAYHSEKLAVAFGLLELPQGTPIRIYKNLRVCGDCHTAMKFISSVYSRTIILRDSNRFHH 722
            LAYHSEKLAVAFGLL +PQG PIRI+KNLRVCGDCHTAMK+ S VY+R IILRDSN FHH
Sbjct: 443  LAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSKVYARHIILRDSNCFHH 502

Query: 723  FKEGVCSCGDYW 758
            F EG CSCGDYW
Sbjct: 503  FTEGRCSCGDYW 514


>ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 852

 Score =  381 bits (978), Expect = e-103
 Identities = 174/251 (69%), Positives = 211/251 (84%)
 Frame = +3

Query: 6    QYFDSMVNAYHIKPGPDHYACMIDLLGRSGKISEAEELLNDMVVEPDATVWKALLSACRV 185
            +YF  M   Y I+PGP+HYACMIDL GR GK+ EA+E+LN M V+PDATVWKALL+ACRV
Sbjct: 602  KYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRV 661

Query: 186  HGKLELAEKAANILFELEPQDAVPYIMLSNLYSSVGKWDDAARIRRLMKSRGVNKEPGYS 365
            HG LEL E+AA  LFELEP +A+PY+MLSN+Y +  KWDDAA+IRRLMKS+G+ KEPG S
Sbjct: 662  HGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGCS 721

Query: 366  WMEINSQVHSFMSEDRSHEKSNVIYSKINEVMMLIREAGYIPDMNFALHNIDEEGKELGL 545
            W+E+NS++H+F+SEDR H +   IYSKI+E++  I+E GY+PDMNF+LH++D EGKE GL
Sbjct: 722  WIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREGKEAGL 781

Query: 546  AYHSEKLAVAFGLLELPQGTPIRIYKNLRVCGDCHTAMKFISSVYSRTIILRDSNRFHHF 725
            AYHSEKLAVAFGLL  P G PIRI+KNLRVCGDCH+AMK+IS V++R IILRDSN FHHF
Sbjct: 782  AYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDSNCFHHF 841

Query: 726  KEGVCSCGDYW 758
            KEG CSC DYW
Sbjct: 842  KEGECSCEDYW 852


Top