BLASTX nr result

ID: Atractylodes22_contig00027783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027783
         (1183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]    61   5e-14
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...    61   5e-14
emb|CBI16626.3| unnamed protein product [Vitis vinifera]               61   5e-14
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...    57   5e-13
ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Popu...    57   5e-13

>emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]
          Length = 1054

 Score = 60.8 bits (146), Expect(2) = 5e-14
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = -2

Query: 210 QASGKIIVLD*LLQKLRNSRHRVLLFAQMIHTLDVLQ 100
           QASGK+I+LD LLQKL NS HRVLLFAQM HTLD+LQ
Sbjct: 442 QASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQ 478



 Score = 43.9 bits (102), Expect(2) = 5e-14
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = -3

Query: 101 RAEERFAAIRSFSRQSVVGHSNSEADHDSAFVF 3
           RAEERF+AIRSFSRQ V G  NS+    SAFVF
Sbjct: 496 RAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVF 528


>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
           vinifera]
          Length = 876

 Score = 60.8 bits (146), Expect(2) = 5e-14
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = -2

Query: 210 QASGKIIVLD*LLQKLRNSRHRVLLFAQMIHTLDVLQ 100
           QASGK+I+LD LLQKL NS HRVLLFAQM HTLD+LQ
Sbjct: 362 QASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQ 398



 Score = 43.9 bits (102), Expect(2) = 5e-14
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = -3

Query: 101 RAEERFAAIRSFSRQSVVGHSNSEADHDSAFVF 3
           RAEERF+AIRSFSRQ V G  NS+    SAFVF
Sbjct: 416 RAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVF 448


>emb|CBI16626.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score = 60.8 bits (146), Expect(2) = 5e-14
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = -2

Query: 210 QASGKIIVLD*LLQKLRNSRHRVLLFAQMIHTLDVLQ 100
           QASGK+I+LD LLQKL NS HRVLLFAQM HTLD+LQ
Sbjct: 361 QASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQ 397



 Score = 43.9 bits (102), Expect(2) = 5e-14
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = -3

Query: 101 RAEERFAAIRSFSRQSVVGHSNSEADHDSAFVF 3
           RAEERF+AIRSFSRQ V G  NS+    SAFVF
Sbjct: 415 RAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVF 447


>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835143|gb|EEE73578.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 866

 Score = 57.0 bits (136), Expect(2) = 5e-13
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = -2

Query: 210 QASGKIIVLD*LLQKLRNSRHRVLLFAQMIHTLDVLQ 100
           +ASGK+I+LD LL+KL +S HRVLLFAQM HTLD+LQ
Sbjct: 358 KASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQ 394



 Score = 44.3 bits (103), Expect(2) = 5e-13
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = -3

Query: 101 RAEERFAAIRSFSRQSVVGHSNSEADHDSAFVF 3
           RAEERFAAIRSFS QS  G S SE+D +S+FVF
Sbjct: 412 RAEERFAAIRSFSGQS--GRSGSESDQNSSFVF 442


>ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Populus trichocarpa]
           gi|222835142|gb|EEE73577.1| hypothetical protein
           POPTRDRAFT_781297 [Populus trichocarpa]
          Length = 485

 Score = 57.0 bits (136), Expect(2) = 5e-13
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = -2

Query: 210 QASGKIIVLD*LLQKLRNSRHRVLLFAQMIHTLDVLQ 100
           +ASGK+I+LD LL+KL +S HRVLLFAQM HTLD+LQ
Sbjct: 367 KASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQ 403



 Score = 44.3 bits (103), Expect(2) = 5e-13
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = -3

Query: 101 RAEERFAAIRSFSRQSVVGHSNSEADHDSAFVF 3
           RAEERFAAIRSFS QS  G S SE+D +S+FVF
Sbjct: 421 RAEERFAAIRSFSGQS--GRSGSESDQNSSFVF 451


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