BLASTX nr result

ID: Atractylodes22_contig00027778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027778
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    63   2e-08
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    61   8e-08
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    59   3e-07
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis]
           gi|223543892|gb|EEF45418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
 Frame = +3

Query: 21  LGVLQGCLSTLCNDMYYTNADIWLMKEYGVVNSWTKFIKIPL--NMGIENISHMMPXXXX 194
           LGVL GCL  +CN  +   AD W+MKEYGV  SW + + +P     G  ++ + +P    
Sbjct: 207 LGVLDGCLCVMCN-YHAVRADFWVMKEYGVRESWIRLVTVPYLDYPGSLHLQYSVP-YAI 264

Query: 195 XXXXXXXXXXXQSFVIYNVKKKAFRHVTMAHDLKWFGDAAVYVESLFSPEV 347
                       S VIYN     F++  + +   W  DA VY++SL SP+V
Sbjct: 265 ADNGEVLLEFKSSLVIYNPNYGTFKYPVINNSCSWV-DAEVYIDSLVSPKV 314


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/107 (35%), Positives = 53/107 (49%)
 Frame = +3

Query: 21  LGVLQGCLSTLCNDMYYTNADIWLMKEYGVVNSWTKFIKIPLNMGIENISHMMPXXXXXX 200
           LGVLQGCL  +  D   T+  +W+MK+YG   SW K + IP     EN S+  P      
Sbjct: 299 LGVLQGCLC-MNYDYKKTHFVVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISEN 357

Query: 201 XXXXXXXXXQSFVIYNVKKKAFRHVTMAHDLKWFGDAAVYVESLFSP 341
                       ++YN +  +F++  +     WF DA VYVE+L SP
Sbjct: 358 GEVLLMFEF-DLILYNPRDNSFKYPKIESGKGWF-DAEVYVETLVSP 402


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/107 (34%), Positives = 54/107 (50%)
 Frame = +3

Query: 21  LGVLQGCLSTLCNDMYYTNADIWLMKEYGVVNSWTKFIKIPLNMGIENISHMMPXXXXXX 200
           LGVLQGCL  +  D   T+  +W+MK+YGV  SW K + IP     E+ S+  P      
Sbjct: 300 LGVLQGCLC-MNYDYKKTHFVVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISEN 358

Query: 201 XXXXXXXXXQSFVIYNVKKKAFRHVTMAHDLKWFGDAAVYVESLFSP 341
                       ++Y+ +  +F++  +     WF DA VYVE+L SP
Sbjct: 359 GKVLLMFEF-DLILYDPRNNSFKYPKIESGKGWF-DAEVYVETLVSP 403


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
 Frame = +3

Query: 21  LGVLQGCLSTLCNDMYYTNAD--IWLMKEYGVVNSWTKFIKIPLNMGIENISHMMPXXXX 194
           L VL+GCL   C +  Y   D  +WLMK+YGV  SW K + IP     E+ S+  P    
Sbjct: 260 LSVLKGCL---CMNYDYKKTDFVVWLMKDYGVRESWIKLLTIPYLPNPEDFSYSGPYCIS 316

Query: 195 XXXXXXXXXXXQSFVIYNVKKKAFRHVTMAHDLKWFGDAAVYVESLFSP 341
                         ++Y+ +  +FR+  +     WF DA VYVESL SP
Sbjct: 317 ENGEVLLMFEF-DLILYDPRDHSFRYPRIEGGKGWF-DAEVYVESLVSP 363


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 39/110 (35%), Positives = 52/110 (47%)
 Frame = +3

Query: 18  ILGVLQGCLSTLCNDMYYTNADIWLMKEYGVVNSWTKFIKIPLNMGIENISHMMPXXXXX 197
           +LGVLQG L  +CN      AD+W++KE+GV +SWTK   IP  +      H        
Sbjct: 335 VLGVLQGWLCVMCN-YQGVRADVWVLKEFGVRDSWTKLFSIPY-LDDPLWFHYSVPLCID 392

Query: 198 XXXXXXXXXXQSFVIYNVKKKAFRHVTMAHDLKWFGDAAVYVESLFSPEV 347
                        VIYN K   FR+  M +      +A VY++SL SP V
Sbjct: 393 VGGEVLLEYKSVLVIYNPKHGTFRYPVM-NGASSCIEADVYIQSLVSPVV 441


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