BLASTX nr result

ID: Atractylodes22_contig00027756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027756
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25673.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homol...   107   8e-22
gb|AFW59083.1| nucleolar complex protein 4 [Zea mays]                 107   1e-21
ref|NP_001147998.1| LOC100281607 [Zea mays] gi|195615050|gb|ACG2...   107   1e-21

>emb|CBI25673.3| unnamed protein product [Vitis vinifera]
          Length = 235

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/90 (60%), Positives = 70/90 (77%)
 Frame = +1

Query: 4   DPESIYLTWVRSKFDEFVQCLIQLSVSPTISDEALREVVMDTLMECVKVGNAGKFHSSIY 183
           DPE IY TW+RSKFD+FV+ LI +  S T  +E LREVV+DT+ME VK+GN+G+F+S++Y
Sbjct: 79  DPELIYRTWLRSKFDDFVKSLIDILTSSTC-EETLREVVLDTIMELVKLGNSGRFNSAVY 137

Query: 184 HKFIHSMVYSIEEADTLLNLLVLKYFKYID 273
           H+FIHS+V S      LL+LL  KYFKYID
Sbjct: 138 HRFIHSIVGSTMSVTFLLDLLESKYFKYID 167


>ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|222849985|gb|EEE87532.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score =  108 bits (270), Expect = 4e-22
 Identities = 53/90 (58%), Positives = 69/90 (76%)
 Frame = +1

Query: 4   DPESIYLTWVRSKFDEFVQCLIQLSVSPTISDEALREVVMDTLMECVKVGNAGKFHSSIY 183
           D + IY TW+RSKFDEFV+ L+ ++VSP   D AL+EVV+DTLME VK GN G+F+S+IY
Sbjct: 81  DADVIYKTWLRSKFDEFVKSLVDVAVSPKAED-ALKEVVLDTLMEFVKTGNGGRFNSAIY 139

Query: 184 HKFIHSMVYSIEEADTLLNLLVLKYFKYID 273
           H+F+ ++V S E  D +L LL  KYFKYID
Sbjct: 140 HRFLVNIVQSTESLDFVLELLASKYFKYID 169


>ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]
          Length = 581

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/91 (57%), Positives = 66/91 (72%)
 Frame = +1

Query: 1   EDPESIYLTWVRSKFDEFVQCLIQLSVSPTISDEALREVVMDTLMECVKVGNAGKFHSSI 180
           +  E IYL W+RSKFDEF++ L+ +  SP   DE L+E+V+DTLME VKV N G FHSS+
Sbjct: 79  DQSEFIYLAWLRSKFDEFLKSLLDVLASPQ-GDETLKELVLDTLMEFVKVANGGAFHSSL 137

Query: 181 YHKFIHSMVYSIEEADTLLNLLVLKYFKYID 273
           YHK +HS+VYS      L++LL  KYFKYID
Sbjct: 138 YHKLLHSIVYSSSPPTFLVDLLATKYFKYID 168


>gb|AFW59083.1| nucleolar complex protein 4 [Zea mays]
          Length = 593

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/90 (54%), Positives = 69/90 (76%)
 Frame = +1

Query: 4   DPESIYLTWVRSKFDEFVQCLIQLSVSPTISDEALREVVMDTLMECVKVGNAGKFHSSIY 183
           DPE ++  W+R +FDE V  L++LSVSP  SD+A+R+V +D LM+ VK+G  GKFHS+IY
Sbjct: 95  DPELVFGAWLRQRFDELVAALVELSVSPH-SDDAIRDVALDALMDFVKLGKDGKFHSAIY 153

Query: 184 HKFIHSMVYSIEEADTLLNLLVLKYFKYID 273
           HKF++++V++ +  D LL LLV KYFKY D
Sbjct: 154 HKFLYAVVHAADPVDMLLELLVSKYFKYTD 183


>ref|NP_001147998.1| LOC100281607 [Zea mays] gi|195615050|gb|ACG29355.1| nucleolar
           complex protein 4 [Zea mays]
          Length = 593

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/90 (54%), Positives = 69/90 (76%)
 Frame = +1

Query: 4   DPESIYLTWVRSKFDEFVQCLIQLSVSPTISDEALREVVMDTLMECVKVGNAGKFHSSIY 183
           DPE ++  W+R +FDE V  L++LSVSP  SD+A+R+V +D LM+ VK+G  GKFHS+IY
Sbjct: 95  DPELVFGAWLRQRFDELVAALVELSVSPH-SDDAIRDVALDALMDFVKLGKDGKFHSAIY 153

Query: 184 HKFIHSMVYSIEEADTLLNLLVLKYFKYID 273
           HKF++++V++ +  D LL LLV KYFKY D
Sbjct: 154 HKFLYAVVHAADPVDMLLELLVSKYFKYTD 183


Top