BLASTX nr result

ID: Atractylodes22_contig00027744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027744
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...    62   6e-15
gb|ABN08132.1| Putative non-LTR retroelement reverse transcripta...    62   2e-14
gb|ABD32793.1| Putative non-LTR retroelement reverse transcripta...    49   4e-10
emb|CAN70844.1| hypothetical protein VITISV_007637 [Vitis vinifera]    58   6e-09
ref|XP_003618219.1| hypothetical protein MTR_6g006160 [Medicago ...    55   7e-08

>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score = 61.6 bits (148), Expect(2) = 6e-15
 Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
 Frame = -3

Query: 648  EGLWIRVIRSIFGMDGG--LNGGSNSGAIRSGGMGAWGGIVKCGFIIDRLGVSFTDSFGK 475
            EGLW  V+++ +G +GG  +  G +S           GG+       + +G  F  +  +
Sbjct: 1418 EGLWYCVLKARYGEEGGRLMERGRHSSVWWRMLCNVRGGVG------EGVGNWFDGNIRR 1471

Query: 474  RVGDRGGTLFWKEKWVGDSSLNMRFPRLWRLENEKDVLVKDRVSGFGGEIRCSWEWVREL 295
             VG+  GTLFW + WVG+S L  ++PRL+ L   KD  V D       +    W W R L
Sbjct: 1472 EVGNGLGTLFWHDHWVGESPLRYKYPRLFDLAVNKDCTVADMERDGWEDEGGVWVWRRRL 1531

Query: 294  RGRSRGEVEELCSLI 250
                   V E CSL+
Sbjct: 1532 LAWEEESVRE-CSLL 1545



 Score = 45.1 bits (105), Expect(2) = 6e-15
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = -1

Query: 272  LRSCVV*LRGVPFDVGSRDRWHWSLDDKGCFFMGRLRRLIDAIILNQSNSSEKTLWCSLV 93
            +R C + L      V   D+W W+LD    + +    R I +   +   SS   +W + +
Sbjct: 1539 VRECSLLLHNFVLQVNIFDKWRWTLDTVHGYSVREAYRFIVSHGDHLDRSSVDKVWHNYI 1598

Query: 92   PRIVNILIWRLRKGGLPVREVLYKRGL 12
            P  V++ +WRL +  LP R  L +R +
Sbjct: 1599 PSKVSLFVWRLLRNRLPTRGNLLRRNI 1625


>gb|ABN08132.1| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 532

 Score = 61.6 bits (148), Expect(2) = 2e-14
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
 Frame = -3

Query: 648 EGLWIRVIRSIFGMDGG-LNGGSNSGA--------IRSG---GMGAWGGIVKCGFIIDRL 505
           EGLW RV+++ +G  GG L  G   G+        IR G   G+G W             
Sbjct: 187 EGLWYRVLKARYGEIGGRLQEGGRQGSSWWKMLCHIRDGVGEGVGNW------------- 233

Query: 504 GVSFTDSFGKRVGDRGGTLFWKEKWVGDSSLNMRFPRLWRLENEKDVLVKDRVSGFGGEI 325
              F ++  + VGD   T FW + WVG+  L  +FPRL+ L   K+  V + V+    E 
Sbjct: 234 ---FDENIRRVVGDGNNTFFWYDSWVGEMPLCTKFPRLFDLAVNKECSVGEMVTLGWAEG 290

Query: 324 RCSWEWVRELRGRSRGEVEELCSLI 250
             +W W R L       V E C+L+
Sbjct: 291 GRAWVWRRGLLAWEEDSVRE-CTLL 314



 Score = 43.1 bits (100), Expect(2) = 2e-14
 Identities = 24/89 (26%), Positives = 40/89 (44%)
 Frame = -1

Query: 272 LRSCVV*LRGVPFDVGSRDRWHWSLDDKGCFFMGRLRRLIDAIILNQSNSSEKTLWCSLV 93
           +R C + L  V   V   D+W W LD    + +    R I         S    +W   +
Sbjct: 308 VRECTLLLHNVVLQVNVPDKWSWLLDPINGYSVRESYRHITTSGEYVDQSVVDDVWHRYI 367

Query: 92  PRIVNILIWRLRKGGLPVREVLYKRGLDL 6
           P+ V++ +WRL +  LP ++ L +R + L
Sbjct: 368 PQKVSLFVWRLLRNRLPTKDNLMRRRIIL 396


>gb|ABD32793.1| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 373

 Score = 48.5 bits (114), Expect(2) = 4e-10
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
 Frame = -3

Query: 648 EGLWIRVIRSIFGMDGG----LNG-----GSNSGAIRSGGMGAWGGIVKCGFIIDRLGVS 496
           E LW  V+R+ +G  GG      G      S+   IRSG      G+ +  +++D +   
Sbjct: 28  ESLWNVVLRAKYGEVGGRVRFCEGVGSIWWSHLNQIRSGV-----GLAETTWLVDNIV-- 80

Query: 495 FTDSFGKRVGDRGGTLFWKEKWVGDSSLNMRFPRLWRLENEKDVLVKDRVSGFGGEIRCS 316
                 ++V D   T+FW++ W+ D  L + F RL+ L   KDV V++      G    +
Sbjct: 81  ------RKVEDESTTMFWEDPWLLDVPLAVSFSRLFELSENKDVTVREMFLLGWGADGGA 134

Query: 315 WEWVREL 295
           W W R L
Sbjct: 135 WRWRRRL 141



 Score = 42.0 bits (97), Expect(2) = 4e-10
 Identities = 24/84 (28%), Positives = 36/84 (42%)
 Frame = -1

Query: 263 CVV*LRGVPFDVGSRDRWHWSLDDKGCFFMGRLRRLIDAIILNQSNSSEKTLWCSLVPRI 84
           CV  L      V   +RW W L     + +      + A+  N +   ++ LW   VP  
Sbjct: 152 CVERLVNFVLQVDMTNRWVWRLHSSQLYMVHSAYSYLTAVDTNITAEFDQFLWLKAVPLK 211

Query: 83  VNILIWRLRKGGLPVREVLYKRGL 12
           VNI +WRL    L  ++ L KR +
Sbjct: 212 VNIFVWRLFLNRLATKDNLRKRNV 235


>emb|CAN70844.1| hypothetical protein VITISV_007637 [Vitis vinifera]
          Length = 1676

 Score = 58.2 bits (139), Expect(2) = 6e-09
 Identities = 47/136 (34%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
 Frame = -3

Query: 642  LWIRVIRSIFGMDGGLNGGSNSGAIRSG-GMGAWGGIVKCGFIIDRLGVSFTDSFGKRVG 466
            LW +VIR  +G      GG  S  IR   G+G W  I K G  +       T  FG  VG
Sbjct: 1337 LWNQVIRRKYGEX---KGGWRSCEIREAYGVGLWKAINKVGQFV-------TPFFGYEVG 1386

Query: 465  DRGGTLFWKEKWVGDSSLNMRFPRLWRLENEKDVLVKDRVSGFGGEIRCSW--EWVRELR 292
            D     FWK+KW G S L+  FP L+ +   K+  V + V    G+ R SW   + R   
Sbjct: 1387 DGKNVRFWKDKWCGTSPLSETFPSLFSIATSKEAWVNE-VWTAEGDRRGSWTPTFNRPFN 1445

Query: 291  GRSRGEVEELCSLIEG 244
                 EV  L   +EG
Sbjct: 1446 DWKLEEVGRLLRCLEG 1461



 Score = 28.1 bits (61), Expect(2) = 6e-09
 Identities = 19/79 (24%), Positives = 30/79 (37%)
 Frame = -1

Query: 251  LRGVPFDVGSRDRWHWSLDDKGCFFMGRLRRLIDAIILNQSNSSEKTLWCSLVPRIVNIL 72
            L G    V   DR  W     G F +  L R +  +  + +    K +W S     ++  
Sbjct: 1459 LEGKMVRVDEEDRVRWVESKDGVFSVKSLYRTMQPV--SSAWFPSKIIWMSYAQPKISFF 1516

Query: 71   IWRLRKGGLPVREVLYKRG 15
            +W    G +   + L KRG
Sbjct: 1517 VWEASWGXVLTLDRLQKRG 1535


>ref|XP_003618219.1| hypothetical protein MTR_6g006160 [Medicago truncatula]
           gi|355493234|gb|AES74437.1| hypothetical protein
           MTR_6g006160 [Medicago truncatula]
          Length = 325

 Score = 54.7 bits (130), Expect(2) = 7e-08
 Identities = 28/85 (32%), Positives = 45/85 (52%)
 Frame = -3

Query: 501 VSFTDSFGKRVGDRGGTLFWKEKWVGDSSLNMRFPRLWRLENEKDVLVKDRVSGFGGEIR 322
           + + +   +R+G+   T FWK+KWVGD+ L   FPRL+ L N+K+  V D V   GG   
Sbjct: 55  MGYMNKVRRRIGNGRNTSFWKDKWVGDAPLFRTFPRLFSLSNQKEAKVGDVVEIRGGGCV 114

Query: 321 CSWEWVRELRGRSRGEVEELCSLIE 247
            +  W R         ++ L +++E
Sbjct: 115 WNTTWRRNPFMWETNLIQNLMAILE 139



 Score = 28.1 bits (61), Expect(2) = 7e-08
 Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
 Frame = -1

Query: 227 GSRDRWHWSLDDKGCFFMGRLRRLIDAIILNQSNSSEKTLWCSLVPRIVNILIWRLRKGG 48
           G  D+W W  +D G              ++N+   S   LW S  P  V    W L    
Sbjct: 145 GGEDKWEWIPEDNG--------------VINEGVFS--ALWKSPAPSKVVAFSWSLLLDR 188

Query: 47  LPVREVLYKRG-LDLD 3
           +P R+ L  R  LDLD
Sbjct: 189 IPWRDNLALRHILDLD 204


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