BLASTX nr result

ID: Atractylodes22_contig00027743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027743
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304341.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002326730.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   103   1e-20
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   103   1e-20
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici...    97   1e-18

>ref|XP_002304341.1| predicted protein [Populus trichocarpa] gi|222841773|gb|EEE79320.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/81 (64%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   DAKDSPTAMDSNKQGIMPSKIPVETVVASAPSAAHSDGYHVGVPSQRLPGVIPRTGQRPF 181
           +AKDS +    +KQG MPSK P ET VAS  S  HSD YH+GV SQR   +I R+GQR  
Sbjct: 291 EAKDSSSVPVESKQGGMPSKTPPETAVASVTSVPHSDVYHLGVSSQRSSILIQRSGQRTH 350

Query: 182 QKWKGPDKISRIYGDWIDDNE 244
           +KWKGPDKISRIYGDWIDD E
Sbjct: 351 EKWKGPDKISRIYGDWIDDIE 371


>ref|XP_002326730.1| predicted protein [Populus trichocarpa] gi|222834052|gb|EEE72529.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/81 (65%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   DAKDSPTAMDSNKQGIMPSKIPVETVVASAPSAAHSDGYHVGVPSQRLPGVIPRTGQRPF 181
           DAKDS      +KQG +PSK P ETVVAS  S  +SD YH+GVPSQ+   +I R GQR  
Sbjct: 292 DAKDSAFVPVESKQGGVPSKTPPETVVASVTSVPNSDVYHLGVPSQKSSILIQRPGQRTH 351

Query: 182 QKWKGPDKISRIYGDWIDDNE 244
           QKWKGPDKISRIYGDWIDD E
Sbjct: 352 QKWKGPDKISRIYGDWIDDIE 372


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 350

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/81 (65%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   DAKDSPTAMDSNKQGIMPSKIPVETVVASAPSAAHSDGYHVGVPSQRLPGVIPRTGQRPF 181
           + +DS  A    KQG++P K P +T+VAS PSA HSD YHV VPSQR   VI R GQR  
Sbjct: 271 ETRDSSAAPPDLKQGVLP-KAPGDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTH 329

Query: 182 QKWKGPDKISRIYGDWIDDNE 244
           QKWKGPDKISRIYGDWIDD E
Sbjct: 330 QKWKGPDKISRIYGDWIDDIE 350


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 339

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/81 (65%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   DAKDSPTAMDSNKQGIMPSKIPVETVVASAPSAAHSDGYHVGVPSQRLPGVIPRTGQRPF 181
           + +DS  A    KQG++P K P +T+VAS PSA HSD YHV VPSQR   VI R GQR  
Sbjct: 260 ETRDSSAAPPDLKQGVLP-KAPGDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTH 318

Query: 182 QKWKGPDKISRIYGDWIDDNE 244
           QKWKGPDKISRIYGDWIDD E
Sbjct: 319 QKWKGPDKISRIYGDWIDDIE 339


>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532956|gb|EEF34722.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 349

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/81 (59%), Positives = 55/81 (67%)
 Frame = +2

Query: 2   DAKDSPTAMDSNKQGIMPSKIPVETVVASAPSAAHSDGYHVGVPSQRLPGVIPRTGQRPF 181
           + KD  +     KQG + SK P + VVAS  S  HSD YH+GVPSQR   ++ R GQR  
Sbjct: 269 EGKDPSSVPADTKQGGVLSKTPADIVVASVASVPHSDVYHLGVPSQRPSILMQRPGQRSH 328

Query: 182 QKWKGPDKISRIYGDWIDDNE 244
           QKWKGPDKISRIYGDWIDD E
Sbjct: 329 QKWKGPDKISRIYGDWIDDIE 349


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