BLASTX nr result

ID: Atractylodes22_contig00027725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027725
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322969.1| auxin influx carrier component [Populus tric...    59   3e-07
gb|ABN81349.1| auxin influx transport protein [Casuarina glauca]...    59   3e-07
emb|CCF23025.1| auxin influx carrier protein [Mangifera indica] ...    59   4e-07
ref|XP_002268925.1| PREDICTED: auxin transporter-like protein 2 ...    59   4e-07
emb|CAN76469.1| hypothetical protein VITISV_030043 [Vitis vinifera]    59   4e-07

>ref|XP_002322969.1| auxin influx carrier component [Populus trichocarpa]
           gi|222867599|gb|EEF04730.1| auxin influx carrier
           component [Populus trichocarpa]
          Length = 477

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 4/42 (9%)
 Frame = +1

Query: 4   AFGDQLLNHSNVFSLLPRTGFHDATIIIVVIHQI----FSCT 117
           AFGDQLLNHSN F+LLPR GF DA +I+++IHQ     F+CT
Sbjct: 289 AFGDQLLNHSNAFALLPRNGFRDAAVILMLIHQFITFGFACT 330


>gb|ABN81349.1| auxin influx transport protein [Casuarina glauca]
           gi|126217794|gb|ABN81350.1| auxin influx transport
           protein [Casuarina glauca]
          Length = 480

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 4/42 (9%)
 Frame = +1

Query: 4   AFGDQLLNHSNVFSLLPRTGFHDATIIIVVIHQI----FSCT 117
           AFGD+LLNHSN FSLLPR GF DA +I+++IHQ     F+CT
Sbjct: 288 AFGDELLNHSNAFSLLPRNGFRDAAVILMLIHQFITFGFACT 329


>emb|CCF23025.1| auxin influx carrier protein [Mangifera indica]
           gi|381280181|gb|AFG18185.1| auxin influx carrier
           component [Mangifera indica]
          Length = 481

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%), Gaps = 4/42 (9%)
 Frame = +1

Query: 4   AFGDQLLNHSNVFSLLPRTGFHDATIIIVVIHQI----FSCT 117
           AFGDQLLNHSN FSLLPRTG+ D  +I+++IHQ     F+CT
Sbjct: 289 AFGDQLLNHSNAFSLLPRTGWRDTAVILMLIHQFITFGFACT 330


>ref|XP_002268925.1| PREDICTED: auxin transporter-like protein 2 [Vitis vinifera]
           gi|297736635|emb|CBI25506.3| unnamed protein product
           [Vitis vinifera]
          Length = 471

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/42 (64%), Positives = 34/42 (80%), Gaps = 4/42 (9%)
 Frame = +1

Query: 4   AFGDQLLNHSNVFSLLPRTGFHDATIIIVVIHQI----FSCT 117
           AFGDQLL+HSN FSLLP+TGF DA +I+++IHQ     F+CT
Sbjct: 287 AFGDQLLDHSNAFSLLPQTGFRDAAVILMLIHQFITFGFACT 328


>emb|CAN76469.1| hypothetical protein VITISV_030043 [Vitis vinifera]
          Length = 872

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/42 (64%), Positives = 34/42 (80%), Gaps = 4/42 (9%)
 Frame = +1

Query: 4   AFGDQLLNHSNVFSLLPRTGFHDATIIIVVIHQI----FSCT 117
           AFGDQLL+HSN FSLLP+TGF DA +I+++IHQ     F+CT
Sbjct: 625 AFGDQLLDHSNAFSLLPQTGFRDAAVILMLIHQFITFGFACT 666


Top