BLASTX nr result

ID: Atractylodes22_contig00027703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027703
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23321.3| unnamed protein product [Vitis vinifera]               73   3e-21
ref|XP_002271089.2| PREDICTED: anaphase-promoting complex subuni...    73   3e-21
emb|CBI23319.3| unnamed protein product [Vitis vinifera]               71   1e-20
ref|XP_003635005.1| PREDICTED: anaphase-promoting complex subuni...    71   1e-20
ref|XP_004148721.1| PREDICTED: anaphase-promoting complex subuni...    71   4e-18

>emb|CBI23321.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score = 72.8 bits (177), Expect(2) = 3e-21
 Identities = 39/66 (59%), Positives = 44/66 (66%), Gaps = 10/66 (15%)
 Frame = -3

Query: 168 VDCKLLNASICKVALSKDLCRLTVLCSGEL----------QVPGHDLHGFHCLTLDTSIF 19
           V  +LLNASICKVALSKDLC L V CSGEL           + GH L G H L LDTSIF
Sbjct: 214 VTYRLLNASICKVALSKDLCHLIVTCSGELVEESVESRDRHIFGHGLLGLHSLVLDTSIF 273

Query: 18  YRRRNE 1
           ++R+NE
Sbjct: 274 WKRKNE 279



 Score = 53.9 bits (128), Expect(2) = 3e-21
 Identities = 30/63 (47%), Positives = 33/63 (52%)
 Frame = -2

Query: 457 RAPGLVPGETGFMDXXXXXXXXXXXXSHQRFNILCSADKDXXXXXXXXXXXXXXXIDIHD 278
           R PGLV G+TGFMD            SHQRFNILCS DKD               I+IH+
Sbjct: 143 RMPGLVSGDTGFMDDSEDSFGELSNSSHQRFNILCSGDKDGSICFSIFGMFPIGKINIHE 202

Query: 277 FSV 269
           FSV
Sbjct: 203 FSV 205


>ref|XP_002271089.2| PREDICTED: anaphase-promoting complex subunit 4-like [Vitis
           vinifera]
          Length = 767

 Score = 72.8 bits (177), Expect(2) = 3e-21
 Identities = 39/66 (59%), Positives = 44/66 (66%), Gaps = 10/66 (15%)
 Frame = -3

Query: 168 VDCKLLNASICKVALSKDLCRLTVLCSGEL----------QVPGHDLHGFHCLTLDTSIF 19
           V  +LLNASICKVALSKDLC L V CSGEL           + GH L G H L LDTSIF
Sbjct: 214 VTYRLLNASICKVALSKDLCHLIVTCSGELVEESVESRDRHIFGHGLLGLHSLVLDTSIF 273

Query: 18  YRRRNE 1
           ++R+NE
Sbjct: 274 WKRKNE 279



 Score = 53.9 bits (128), Expect(2) = 3e-21
 Identities = 30/63 (47%), Positives = 33/63 (52%)
 Frame = -2

Query: 457 RAPGLVPGETGFMDXXXXXXXXXXXXSHQRFNILCSADKDXXXXXXXXXXXXXXXIDIHD 278
           R PGLV G+TGFMD            SHQRFNILCS DKD               I+IH+
Sbjct: 143 RMPGLVSGDTGFMDDSEDSFGELSNSSHQRFNILCSGDKDGSICFSIFGMFPIGKINIHE 202

Query: 277 FSV 269
           FSV
Sbjct: 203 FSV 205


>emb|CBI23319.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score = 70.9 bits (172), Expect(2) = 1e-20
 Identities = 38/66 (57%), Positives = 44/66 (66%), Gaps = 10/66 (15%)
 Frame = -3

Query: 168 VDCKLLNASICKVALSKDLCRLTVLCSGEL----------QVPGHDLHGFHCLTLDTSIF 19
           V  +LLNASICKVALSKDLC L V CSGEL           + GH L G H L L+TSIF
Sbjct: 141 VTYRLLNASICKVALSKDLCHLIVTCSGELVEQSVESRDRHIFGHGLLGLHSLVLNTSIF 200

Query: 18  YRRRNE 1
           ++R+NE
Sbjct: 201 WKRKNE 206



 Score = 53.9 bits (128), Expect(2) = 1e-20
 Identities = 30/63 (47%), Positives = 33/63 (52%)
 Frame = -2

Query: 457 RAPGLVPGETGFMDXXXXXXXXXXXXSHQRFNILCSADKDXXXXXXXXXXXXXXXIDIHD 278
           R PGLV G+TGFMD            SHQRFNILCS DKD               I+IH+
Sbjct: 70  RMPGLVSGDTGFMDDSEDSFGELSNSSHQRFNILCSGDKDGSICFSIFGIFPIGKINIHE 129

Query: 277 FSV 269
           FSV
Sbjct: 130 FSV 132


>ref|XP_003635005.1| PREDICTED: anaphase-promoting complex subunit 4-like [Vitis
           vinifera]
          Length = 543

 Score = 70.9 bits (172), Expect(2) = 1e-20
 Identities = 38/66 (57%), Positives = 44/66 (66%), Gaps = 10/66 (15%)
 Frame = -3

Query: 168 VDCKLLNASICKVALSKDLCRLTVLCSGEL----------QVPGHDLHGFHCLTLDTSIF 19
           V  +LLNASICKVALSKDLC L V CSGEL           + GH L G H L L+TSIF
Sbjct: 151 VTYRLLNASICKVALSKDLCHLIVTCSGELVEQSVESRDRHIFGHGLLGLHSLVLNTSIF 210

Query: 18  YRRRNE 1
           ++R+NE
Sbjct: 211 WKRKNE 216



 Score = 53.9 bits (128), Expect(2) = 1e-20
 Identities = 30/63 (47%), Positives = 33/63 (52%)
 Frame = -2

Query: 457 RAPGLVPGETGFMDXXXXXXXXXXXXSHQRFNILCSADKDXXXXXXXXXXXXXXXIDIHD 278
           R PGLV G+TGFMD            SHQRFNILCS DKD               I+IH+
Sbjct: 80  RMPGLVSGDTGFMDDSEDSFGELSNSSHQRFNILCSGDKDGSICFSIFGIFPIGKINIHE 139

Query: 277 FSV 269
           FSV
Sbjct: 140 FSV 142


>ref|XP_004148721.1| PREDICTED: anaphase-promoting complex subunit 4-like [Cucumis
           sativus]
          Length = 1420

 Score = 70.9 bits (172), Expect(2) = 4e-18
 Identities = 37/64 (57%), Positives = 42/64 (65%), Gaps = 10/64 (15%)
 Frame = -3

Query: 162 CKLLNASICKVALSKDLCRLTVLCSGELQVPGHD----------LHGFHCLTLDTSIFYR 13
           C LLNA I KVALSKD CRL V+CSGEL   GHD          +HG H L LDTSIF +
Sbjct: 215 CHLLNAEIYKVALSKDFCRLVVMCSGELVGHGHDPRKRQITVQGVHGMHSLVLDTSIFRK 274

Query: 12  RRNE 1
           R++E
Sbjct: 275 RKSE 278



 Score = 45.1 bits (105), Expect(2) = 4e-18
 Identities = 30/76 (39%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
 Frame = -2

Query: 457 RAPGLVPGETGFMDXXXXXXXXXXXXSHQRFNILCSADKDXXXXXXXXXXXXXXXIDIH- 281
           R PGLV G+TGF+D            S QRFNILCS DKD               I+IH 
Sbjct: 144 RMPGLVSGDTGFIDDSEDSFTELSNSSQQRFNILCSGDKDGSIRFSIFGVFPIGKINIHE 203

Query: 280 ------DFSVRCPLAN 251
                 D S  C L N
Sbjct: 204 LHIPLQDASASCHLLN 219


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