BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027689
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]         84   1e-14
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]    63   2e-08
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16...    63   2e-08
gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subc...    59   3e-07
gb|ABA93952.1| retrotransposon protein, putative, Ty1-copia subc...    59   3e-07

>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/87 (51%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = -2

Query: 301 FLMSGTTSHVSGTRTDFVDYRPVTR-RYVTSFDSHRSEVTGVGTVELRFSTGESLTLKDV 125
           FL SG T HV G R  F+ Y PV +   V   D HR EV G GTV L F  G+ +TL+DV
Sbjct: 319 FLDSGATVHVCGNRGSFLTYAPVPQGTVVVCADGHRVEVRGKGTVRLNFRDGQVVTLQDV 378

Query: 124 LHVPSVSKGLVSASKLVENGYFVSLGN 44
           LHVP ++KGLVSA K   NGY + + N
Sbjct: 379 LHVPGITKGLVSADKFDRNGYKLVIKN 405


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = -2

Query: 292 SGTTSHVSGTRTDFVDYRPVTRRYVTSFDSHRSEVTGVGTVELRFSTGESLTLKDVLHVP 113
           SG   HV    + F  Y+      +   +  R+ V GVGTV L+F++G+++ LK V HVP
Sbjct: 320 SGANIHVCADASMFTSYQVGRSGALLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQHVP 379

Query: 112 SVSKGLVSASKLVENGYFVSL-GNKVTIFK 26
           S+ K LVSAS L  +GY V L  NK  + K
Sbjct: 380 SIKKNLVSASMLCRDGYKVVLESNKCVVSK 409


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
           gag/pol protein [Zea mays]
          Length = 1279

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = -2

Query: 292 SGTTSHVSGTRTDFVDYRPVTRRYVTSFDSHRSEVTGVGTVELRFSTGESLTLKDVLHVP 113
           SG   HV    + F  Y+      +   +  R+ V GVGTV L+F++G+++ LK V HVP
Sbjct: 280 SGANIHVCADASMFTSYQVGRSGALLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQHVP 339

Query: 112 SVSKGLVSASKLVENGYFVSL-GNKVTIFK 26
           S+ K LVSAS L  +GY V L  NK  + K
Sbjct: 340 SIKKNLVSASMLCRDGYKVVLESNKCVVSK 369


>gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1361

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = -2

Query: 292 SGTTSHVSGTRTDFVDYRPVTRRYVTSFDSHRSEVTGVGTVELRFSTGESLTLKDVLHVP 113
           +G   HV    + F  Y+      V   +   + V GVGTV+L+F++G+ + LK+V HVP
Sbjct: 389 TGANVHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVP 448

Query: 112 SVSKGLVSASKLVENGY-FVSLGNKVTIFK 26
           S+ + LVS S+L+ +G+  V   NKV + K
Sbjct: 449 SIDRNLVSDSRLIRDGFKLVFESNKVVVSK 478


>gb|ABA93952.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1336

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = -2

Query: 292 SGTTSHVSGTRTDFVDYRPVTRRYVTSFDSHRSEVTGVGTVELRFSTGESLTLKDVLHVP 113
           +G   HV    + F  Y+      V   +   + V GVGTV+L+F++G+ + LK+V HVP
Sbjct: 304 TGANIHVCADISLFSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVP 363

Query: 112 SVSKGLVSASKLVENGY-FVSLGNKVTIFK 26
           S+ + LVS S+L  +G+  V   NKV + K
Sbjct: 364 SIDRNLVSGSRLTRDGFKLVFKSNKVVVSK 393