BLASTX nr result

ID: Atractylodes22_contig00027620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027620
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptas...    58   9e-07
ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...    44   3e-06
gb|ABN04852.1| RNA-directed DNA polymerase (Reverse transcriptas...    47   4e-06

>gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 391

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = -1

Query: 177 GILYGKRCSSLSPFLFLIAAKGLHVAMMEAVSKGVFKGVDVGNDGNRVIISHHLQFADD 1
           G+L G     LSPFLFL+AA+GLHV M   V   +F+G  VG+ GN V++S HLQFADD
Sbjct: 40  GLLQG---DPLSPFLFLLAAEGLHVMMKAMVDASLFRGYRVGS-GNEVVVS-HLQFADD 93


>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score = 44.3 bits (103), Expect(2) = 3e-06
 Identities = 24/49 (48%), Positives = 30/49 (61%)
 Frame = -1

Query: 147  LSPFLFLIAAKGLHVAMMEAVSKGVFKGVDVGNDGNRVIISHHLQFADD 1
            LSPFLFL+AA+G +V M   V   ++ G  VG  G   +   HLQFADD
Sbjct: 1179 LSPFLFLLAAEGFNVLMRALVEAQLYTGYGVGRIGEERLT--HLQFADD 1225



 Score = 31.6 bits (70), Expect(2) = 3e-06
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -2

Query: 251  P*VLKEWIMNSNGAPEFSI--NGSPPSEFSMEKGVRHYLP 138
            P + ++WI    G    SI  NGSP  EF ME+G+R   P
Sbjct: 1139 PTLWRKWISECVGTATASILVNGSPTDEFKMERGLRQEDP 1178


>gb|ABN04852.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 469

 Score = 47.0 bits (110), Expect(2) = 4e-06
 Identities = 29/59 (49%), Positives = 37/59 (62%)
 Frame = -1

Query: 177 GILYGKRCSSLSPFLFLIAAKGLHVAMMEAVSKGVFKGVDVGNDGNRVIISHHLQFADD 1
           G+  G R   LSPFLFL+AA+G HV M       +F G  VG + ++V +S HLQFADD
Sbjct: 117 GLRQGDR---LSPFLFLLAAEGFHVLMKSMTDIDLFHGYTVGRN-DQVSVS-HLQFADD 170



 Score = 28.5 bits (62), Expect(2) = 4e-06
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -2

Query: 251 P*VLKEWIMNSNGAPEFSI--NGSPPSEFSMEKGVR 150
           P + ++WI    G    S+  NGSP  EFS+ +G+R
Sbjct: 84  PTLWRKWIKECIGTATTSVLVNGSPIDEFSLRRGLR 119


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