BLASTX nr result

ID: Atractylodes22_contig00027615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027615
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20740.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   139   2e-31
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   127   9e-28
emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]   127   9e-28
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   126   2e-27

>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/140 (50%), Positives = 98/140 (70%)
 Frame = +3

Query: 60   STDSIMTDSDSADMVHFANKSIHKDNVKDIVVLAIHSGKIYSIIQLLEDATAESPFDGDT 239
            ST  + T+  S   VH AN S+H +N+K++VVLAIH+G+IYSI+ ++ D +AESPFDG  
Sbjct: 891  STGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSA 950

Query: 240  GSNPPRFSSFANYYDKKYGIALAYPEQRLLLLKQSHKAHNLLVDFNGEGILHGKKIRAES 419
              N   +++FA Y++ KYGI L YP Q LLLLKQSH AHNLLV+FN EG   G+ ++   
Sbjct: 951  DVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEG---GEALQTGQ 1007

Query: 420  CKVNTDRLRNHVRIPPELLV 479
             K+  ++ + HV +PPELLV
Sbjct: 1008 -KMLNEKAQTHVHMPPELLV 1026


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  139 bits (351), Expect = 2e-31
 Identities = 70/140 (50%), Positives = 95/140 (67%)
 Frame = +3

Query: 60   STDSIMTDSDSADMVHFANKSIHKDNVKDIVVLAIHSGKIYSIIQLLEDATAESPFDGDT 239
            ST  + T+  S   VH AN S+H +N+K++VVLAIH+G+IYSI+ ++ D +AESPFDG  
Sbjct: 883  STGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSA 942

Query: 240  GSNPPRFSSFANYYDKKYGIALAYPEQRLLLLKQSHKAHNLLVDFNGEGILHGKKIRAES 419
              N   +++FA Y++ KYGI L YP Q LLLLKQSH AHNLLV+FN E  L   +     
Sbjct: 943  DVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEDALQTGQ----- 997

Query: 420  CKVNTDRLRNHVRIPPELLV 479
             K+  ++ + HV +PPELLV
Sbjct: 998  -KMLNEKAQTHVHMPPELLV 1016


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  127 bits (319), Expect = 9e-28
 Identities = 69/161 (42%), Positives = 107/161 (66%), Gaps = 2/161 (1%)
 Frame = +3

Query: 3    NSQFRAKKQACDGRITTLQST--DSIMTDSDSADMVHFANKSIHKDNVKDIVVLAIHSGK 176
            NS   A++    G I+    +  +S  T S++A ++HFAN  +   ++KD VVLAIH+G+
Sbjct: 857  NSSLDAERNYGAGAISDSSPSRNNSTETGSNAASVIHFANCVLDVHSLKDRVVLAIHTGR 916

Query: 177  IYSIIQLLEDATAESPFDGDTGSNPPRFSSFANYYDKKYGIALAYPEQRLLLLKQSHKAH 356
            IYSI++++ + +AESPFDG++   PP + +FA+Y++K+YGI+L++P+Q LL LKQSH  H
Sbjct: 917  IYSIVEVVSNTSAESPFDGNSDKGPPDYITFADYFNKRYGISLSFPKQPLLRLKQSHNPH 976

Query: 357  NLLVDFNGEGILHGKKIRAESCKVNTDRLRNHVRIPPELLV 479
            NLLV+F  EG    K     + K    R + HV +PPEL++
Sbjct: 977  NLLVNFKDEGF--DKLPSGPAFK----RPQMHVHMPPELVL 1011


>emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/111 (54%), Positives = 80/111 (72%)
 Frame = +3

Query: 60   STDSIMTDSDSADMVHFANKSIHKDNVKDIVVLAIHSGKIYSIIQLLEDATAESPFDGDT 239
            ST  + T+  S   VH AN S+H +N+K++VVLAIH+G+IYSI+ ++ D +AESPFDG  
Sbjct: 1892 STGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSA 1951

Query: 240  GSNPPRFSSFANYYDKKYGIALAYPEQRLLLLKQSHKAHNLLVDFNGEGIL 392
              N   +++FA Y++ KYGI L YP Q LLLLKQSH AHNLLV+FN E  +
Sbjct: 1952 DVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEAYI 2002


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
            gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1660

 Score =  126 bits (316), Expect = 2e-27
 Identities = 65/137 (47%), Positives = 91/137 (66%)
 Frame = +3

Query: 69   SIMTDSDSADMVHFANKSIHKDNVKDIVVLAIHSGKIYSIIQLLEDATAESPFDGDTGSN 248
            S +T+    + VHFAN S+  + VKD+VVLAIH+GKIYS+++++ DA+AESPF+ + G  
Sbjct: 894  SSVTECSGGNAVHFANISVDVERVKDMVVLAIHTGKIYSVVEVVGDASAESPFEQNVGGA 953

Query: 249  PPRFSSFANYYDKKYGIALAYPEQRLLLLKQSHKAHNLLVDFNGEGILHGKKIRAESCKV 428
            P +FS+F+ Y++KKYGI L  P Q LLLLKQSHK HNLL   + + +  G  +  +    
Sbjct: 954  PSKFSTFSEYFNKKYGIVLLRPRQPLLLLKQSHKPHNLLNPPDEDTLKDGLVVAKQ---- 1009

Query: 429  NTDRLRNHVRIPPELLV 479
                 R   R+PPELLV
Sbjct: 1010 -----RQFARMPPELLV 1021


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