BLASTX nr result

ID: Atractylodes22_contig00027610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027610
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex s...   221   4e-56
ref|XP_002512015.1| H/ACA ribonucleoprotein complex subunit, put...   217   9e-55
dbj|BAJ53160.1| JHL10I11.6 [Jatropha curcas]                          213   1e-53
ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|1...   211   4e-53
gb|AFK48249.1| unknown [Lotus japonicus]                              209   2e-52

>ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein
           [Vitis vinifera] gi|147867156|emb|CAN80504.1|
           hypothetical protein VITISV_035185 [Vitis vinifera]
           gi|297734127|emb|CBI15374.3| unnamed protein product
           [Vitis vinifera]
          Length = 157

 Score =  221 bits (564), Expect = 4e-56
 Identities = 114/156 (73%), Positives = 123/156 (78%)
 Frame = -3

Query: 485 GSDSEADRSXXXXXXXXXXXXXXXXXXXXXXXXLSKRTLKLVRKAAEHKCLKRGVKEVVK 306
           GSDSEA+RS                        L KRTLKL+R+AAEHKCLKRGVKEVVK
Sbjct: 2   GSDSEAERSAHKEKEKKKLSALAPIAKPLAGKKLCKRTLKLIRRAAEHKCLKRGVKEVVK 61

Query: 305 SIRRGNKGVCVIAGNITPIDVITHVPILCEEADIPYVYVSSKEDLANAGATKRPTCCVLV 126
            IRRG+KG CVIAGNITPIDVITHVPILCEEADIPYVYV SKEDLANAG+TKRPTCCVLV
Sbjct: 62  GIRRGDKGFCVIAGNITPIDVITHVPILCEEADIPYVYVPSKEDLANAGSTKRPTCCVLV 121

Query: 125 LTKPTKGELGEEEQHKLKAEYDQVASEVSQLAATMF 18
           LTKPTKGELG+EEQ KLKAEY QV S+VS L +T+F
Sbjct: 122 LTKPTKGELGQEEQEKLKAEYTQVVSDVSGLTSTLF 157


>ref|XP_002512015.1| H/ACA ribonucleoprotein complex subunit, putative [Ricinus
           communis] gi|223549195|gb|EEF50684.1| H/ACA
           ribonucleoprotein complex subunit, putative [Ricinus
           communis]
          Length = 157

 Score =  217 bits (552), Expect = 9e-55
 Identities = 111/156 (71%), Positives = 125/156 (80%)
 Frame = -3

Query: 485 GSDSEADRSXXXXXXXXXXXXXXXXXXXXXXXXLSKRTLKLVRKAAEHKCLKRGVKEVVK 306
           GSDSEA+RS                        L KRTLKLVRKAAEHKCLKRGVKEVVK
Sbjct: 2   GSDSEAERSHKHEKEKKKIIALSPIAKPLAGKKLCKRTLKLVRKAAEHKCLKRGVKEVVK 61

Query: 305 SIRRGNKGVCVIAGNITPIDVITHVPILCEEADIPYVYVSSKEDLANAGATKRPTCCVLV 126
           SIRRG+KG+CVIAGNI+PIDVITHVPILCEEADIPYVYV SKEDLANAG TKRPTCCVLV
Sbjct: 62  SIRRGHKGLCVIAGNISPIDVITHVPILCEEADIPYVYVPSKEDLANAGVTKRPTCCVLV 121

Query: 125 LTKPTKGELGEEEQHKLKAEYDQVASEVSQLAATMF 18
           LTKP KGE+ +EEQ KLKA++ QVA++VS+LA+++F
Sbjct: 122 LTKPPKGEIPQEEQEKLKADFSQVAADVSELASSLF 157


>dbj|BAJ53160.1| JHL10I11.6 [Jatropha curcas]
          Length = 155

 Score =  213 bits (542), Expect = 1e-53
 Identities = 107/156 (68%), Positives = 126/156 (80%)
 Frame = -3

Query: 485 GSDSEADRSXXXXXXXXXXXXXXXXXXXXXXXXLSKRTLKLVRKAAEHKCLKRGVKEVVK 306
           GSDSEA++S                         SK+TLKLVRKAAEHKCLKRGVKEVVK
Sbjct: 2   GSDSEAEKSQKQEKKKVIALSPIAKPLAGKKL--SKKTLKLVRKAAEHKCLKRGVKEVVK 59

Query: 305 SIRRGNKGVCVIAGNITPIDVITHVPILCEEADIPYVYVSSKEDLANAGATKRPTCCVLV 126
           SIRRG+KG+CVIAGNI+PIDVITHVPILCEE+DIPY+YVSSKEDLANAGATKRPTCCVLV
Sbjct: 60  SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVSSKEDLANAGATKRPTCCVLV 119

Query: 125 LTKPTKGELGEEEQHKLKAEYDQVASEVSQLAATMF 18
           LTKP KG++G+EEQ KLKA++ QV ++VS+L +++F
Sbjct: 120 LTKPPKGDIGQEEQEKLKADFSQVVADVSELTSSLF 155


>ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|118483385|gb|ABK93593.1|
           unknown [Populus trichocarpa]
           gi|118485555|gb|ABK94629.1| unknown [Populus
           trichocarpa] gi|222851227|gb|EEE88774.1| predicted
           protein [Populus trichocarpa]
          Length = 155

 Score =  211 bits (538), Expect = 4e-53
 Identities = 100/121 (82%), Positives = 117/121 (96%)
 Frame = -3

Query: 380 KRTLKLVRKAAEHKCLKRGVKEVVKSIRRGNKGVCVIAGNITPIDVITHVPILCEEADIP 201
           KRTLKLVRKA+E KCLKRGVKEVVKSIRRG+KG+C+IAGNI+PIDVITHVPILCEE+DIP
Sbjct: 35  KRTLKLVRKASESKCLKRGVKEVVKSIRRGHKGLCIIAGNISPIDVITHVPILCEESDIP 94

Query: 200 YVYVSSKEDLANAGATKRPTCCVLVLTKPTKGELGEEEQHKLKAEYDQVASEVSQLAATM 21
           YVYV+SKEDLA+AGATKRPTCCVLVLTKPTKGE+G+E+Q KLKA+YDQV S+VS+L +++
Sbjct: 95  YVYVTSKEDLASAGATKRPTCCVLVLTKPTKGEIGKEDQEKLKADYDQVVSDVSELTSSL 154

Query: 20  F 18
           F
Sbjct: 155 F 155


>gb|AFK48249.1| unknown [Lotus japonicus]
          Length = 157

 Score =  209 bits (531), Expect = 2e-52
 Identities = 103/156 (66%), Positives = 124/156 (79%)
 Frame = -3

Query: 485 GSDSEADRSXXXXXXXXXXXXXXXXXXXXXXXXLSKRTLKLVRKAAEHKCLKRGVKEVVK 306
           GSDSE ++S                        L KRTLKLVR+AAEHKCLKRGVKEVVK
Sbjct: 2   GSDSEGEKSVQKEKERKKLLAVAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVVK 61

Query: 305 SIRRGNKGVCVIAGNITPIDVITHVPILCEEADIPYVYVSSKEDLANAGATKRPTCCVLV 126
           SIRRG+KG+CVIAGNI+PIDVITHVP+LCEE+D+PYVYV+SKEDLA+AGATKRPTCCVLV
Sbjct: 62  SIRRGHKGLCVIAGNISPIDVITHVPVLCEESDVPYVYVTSKEDLASAGATKRPTCCVLV 121

Query: 125 LTKPTKGELGEEEQHKLKAEYDQVASEVSQLAATMF 18
           LTKP KGE+ + EQ KLK++YDQV S+V+++ A++F
Sbjct: 122 LTKPAKGEMEKGEQEKLKSDYDQVVSDVTEITASLF 157


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