BLASTX nr result

ID: Atractylodes22_contig00027563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00027563
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549898.1| PREDICTED: elongation factor G, chloroplasti...   458   e-127
sp|P34811.1|EFGC_SOYBN RecName: Full=Elongation factor G, chloro...   458   e-127
emb|CAA50573.1| translation elongation factor EF-G [Glycine max]      458   e-127
ref|XP_002304430.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126
ref|NP_564801.1| elongation factor EF-G [Arabidopsis thaliana] g...   456   e-126

>ref|XP_003549898.1| PREDICTED: elongation factor G, chloroplastic-like [Glycine max]
          Length = 787

 Score =  458 bits (1178), Expect = e-127
 Identities = 227/248 (91%), Positives = 242/248 (97%)
 Frame = +3

Query: 3    IEGMGELHLEIIIDRLKREFKVEANVGAPQVNYRESISKVAEVKYVHKKQSGGQGQFADI 182
            IEGMGELHLEII+DRLKREFKVEANVGAPQVNYRESISK++EVKYVHKKQSGGQGQFADI
Sbjct: 541  IEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKISEVKYVHKKQSGGQGQFADI 600

Query: 183  TIRFEPLEPGSGYEFKSEIKGGAIPREYIPGVMKGLEECLSNGVLAGFPVVDLRAVLVDG 362
            T+RFEP++PGSGYEFKSEIKGGA+PREYIPGVMKGLEEC+SNGVLAGFPVVD+RAVL DG
Sbjct: 601  TVRFEPMDPGSGYEFKSEIKGGAVPREYIPGVMKGLEECMSNGVLAGFPVVDVRAVLTDG 660

Query: 363  SYHDVDSSVLAFQLAARGAFREGVRKAGPKMLEPIMRVEVVTPEEHLGDVIGDLNSRRGH 542
            SYHDVDSSVLAFQLAARGAFREG+RKAGP+MLEPIM+VEVVTPEEHLGDVIGDLNSRRG 
Sbjct: 661  SYHDVDSSVLAFQLAARGAFREGIRKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQ 720

Query: 543  INNFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQAQLSA 722
            IN+FGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLA FDVVPQHIQ QL A
Sbjct: 721  INSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAMFDVVPQHIQNQL-A 779

Query: 723  SKEEAVAA 746
            +KE+ VAA
Sbjct: 780  TKEQEVAA 787


>sp|P34811.1|EFGC_SOYBN RecName: Full=Elongation factor G, chloroplastic; Short=EF-G; Flags:
            Precursor
          Length = 788

 Score =  458 bits (1178), Expect = e-127
 Identities = 227/248 (91%), Positives = 242/248 (97%)
 Frame = +3

Query: 3    IEGMGELHLEIIIDRLKREFKVEANVGAPQVNYRESISKVAEVKYVHKKQSGGQGQFADI 182
            IEGMGELHLEII+DRLKREFKVEANVGAPQVNYRESISK++EVKYVHKKQSGGQGQFADI
Sbjct: 542  IEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKISEVKYVHKKQSGGQGQFADI 601

Query: 183  TIRFEPLEPGSGYEFKSEIKGGAIPREYIPGVMKGLEECLSNGVLAGFPVVDLRAVLVDG 362
            T+RFEP++PGSGYEFKSEIKGGA+PREYIPGVMKGLEEC+SNGVLAGFPVVD+RAVL DG
Sbjct: 602  TVRFEPMDPGSGYEFKSEIKGGAVPREYIPGVMKGLEECMSNGVLAGFPVVDVRAVLTDG 661

Query: 363  SYHDVDSSVLAFQLAARGAFREGVRKAGPKMLEPIMRVEVVTPEEHLGDVIGDLNSRRGH 542
            SYHDVDSSVLAFQLAARGAFREG+RKAGP+MLEPIM+VEVVTPEEHLGDVIGDLNSRRG 
Sbjct: 662  SYHDVDSSVLAFQLAARGAFREGIRKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQ 721

Query: 543  INNFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQAQLSA 722
            IN+FGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLA FDVVPQHIQ QL A
Sbjct: 722  INSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAMFDVVPQHIQNQL-A 780

Query: 723  SKEEAVAA 746
            +KE+ VAA
Sbjct: 781  TKEQEVAA 788


>emb|CAA50573.1| translation elongation factor EF-G [Glycine max]
          Length = 703

 Score =  458 bits (1178), Expect = e-127
 Identities = 227/248 (91%), Positives = 242/248 (97%)
 Frame = +3

Query: 3    IEGMGELHLEIIIDRLKREFKVEANVGAPQVNYRESISKVAEVKYVHKKQSGGQGQFADI 182
            IEGMGELHLEII+DRLKREFKVEANVGAPQVNYRESISK++EVKYVHKKQSGGQGQFADI
Sbjct: 457  IEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKISEVKYVHKKQSGGQGQFADI 516

Query: 183  TIRFEPLEPGSGYEFKSEIKGGAIPREYIPGVMKGLEECLSNGVLAGFPVVDLRAVLVDG 362
            T+RFEP++PGSGYEFKSEIKGGA+PREYIPGVMKGLEEC+SNGVLAGFPVVD+RAVL DG
Sbjct: 517  TVRFEPMDPGSGYEFKSEIKGGAVPREYIPGVMKGLEECMSNGVLAGFPVVDVRAVLTDG 576

Query: 363  SYHDVDSSVLAFQLAARGAFREGVRKAGPKMLEPIMRVEVVTPEEHLGDVIGDLNSRRGH 542
            SYHDVDSSVLAFQLAARGAFREG+RKAGP+MLEPIM+VEVVTPEEHLGDVIGDLNSRRG 
Sbjct: 577  SYHDVDSSVLAFQLAARGAFREGIRKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQ 636

Query: 543  INNFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQAQLSA 722
            IN+FGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLA FDVVPQHIQ QL A
Sbjct: 637  INSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAMFDVVPQHIQNQL-A 695

Query: 723  SKEEAVAA 746
            +KE+ VAA
Sbjct: 696  TKEQEVAA 703


>ref|XP_002304430.1| predicted protein [Populus trichocarpa] gi|222841862|gb|EEE79409.1|
            predicted protein [Populus trichocarpa]
          Length = 681

 Score =  457 bits (1177), Expect = e-126
 Identities = 225/245 (91%), Positives = 240/245 (97%)
 Frame = +3

Query: 3    IEGMGELHLEIIIDRLKREFKVEANVGAPQVNYRESISKVAEVKYVHKKQSGGQGQFADI 182
            IEGMGELHLEII+DRLKREFKVEANVGAPQVNYRESISKVAEVKYVHKKQSGGQGQFADI
Sbjct: 436  IEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKVAEVKYVHKKQSGGQGQFADI 495

Query: 183  TIRFEPLEPGSGYEFKSEIKGGAIPREYIPGVMKGLEECLSNGVLAGFPVVDLRAVLVDG 362
            T+RFEP+E G+GYEFKSEIKGGA+PREY+PGVMKGLEEC+SNGVLAGFPVVD+RAVLVDG
Sbjct: 496  TVRFEPMEAGTGYEFKSEIKGGAVPREYVPGVMKGLEECMSNGVLAGFPVVDVRAVLVDG 555

Query: 363  SYHDVDSSVLAFQLAARGAFREGVRKAGPKMLEPIMRVEVVTPEEHLGDVIGDLNSRRGH 542
            SYHDVDSSVLAFQLAARGAFREG++KAGP+MLEPIM+VEVVTPEEHLGDVIGDLNSRRG 
Sbjct: 556  SYHDVDSSVLAFQLAARGAFREGIKKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQ 615

Query: 543  INNFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQAQLSA 722
            IN+FGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQ QL+A
Sbjct: 616  INSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQNQLAA 675

Query: 723  SKEEA 737
             +E A
Sbjct: 676  KEEVA 680


>ref|NP_564801.1| elongation factor EF-G [Arabidopsis thaliana]
            gi|6630460|gb|AAF19548.1|AC007190_16 F23N19.11
            [Arabidopsis thaliana] gi|23297147|gb|AAN13104.1| unknown
            protein [Arabidopsis thaliana]
            gi|90855593|tpg|DAA05753.1| TPA_exp: elongation factor G
            [Arabidopsis thaliana] gi|332195879|gb|AEE34000.1|
            elongation factor EF-G [Arabidopsis thaliana]
          Length = 783

 Score =  456 bits (1174), Expect = e-126
 Identities = 229/248 (92%), Positives = 240/248 (96%)
 Frame = +3

Query: 3    IEGMGELHLEIIIDRLKREFKVEANVGAPQVNYRESISKVAEVKYVHKKQSGGQGQFADI 182
            IEGMGELHLEII+DRLKREFKVEANVGAPQVNYRESISK+AEVKY HKKQSGGQGQFADI
Sbjct: 537  IEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKIAEVKYTHKKQSGGQGQFADI 596

Query: 183  TIRFEPLEPGSGYEFKSEIKGGAIPREYIPGVMKGLEECLSNGVLAGFPVVDLRAVLVDG 362
            T+RFEPLE GSGYEFKSEIKGGA+PREYIPGVMKGLEEC+S GVLAGFPVVD+RA LVDG
Sbjct: 597  TVRFEPLEAGSGYEFKSEIKGGAVPREYIPGVMKGLEECMSTGVLAGFPVVDVRACLVDG 656

Query: 363  SYHDVDSSVLAFQLAARGAFREGVRKAGPKMLEPIMRVEVVTPEEHLGDVIGDLNSRRGH 542
            SYHDVDSSVLAFQLAARGAFREG+RKAGP+MLEPIMRVEVVTPEEHLGDVIGDLNSRRG 
Sbjct: 657  SYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMRVEVVTPEEHLGDVIGDLNSRRGQ 716

Query: 543  INNFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQAQLSA 722
            IN+FGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQ QLS 
Sbjct: 717  INSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQNQLS- 775

Query: 723  SKEEAVAA 746
            SK++ VAA
Sbjct: 776  SKDQEVAA 783


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