BLASTX nr result

ID: Atractylodes22_contig00026995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026995
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314907.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYL...    70   2e-10
tpg|DAA34846.1| TPA_inf: chloroplast phylloquinone biosynthesis ...    64   1e-08
ref|XP_002514555.1| menaquinone biosynthesis protein, putative [...    61   8e-08
emb|CBI27424.3| unnamed protein product [Vitis vinifera]               60   1e-07

>ref|XP_002314907.1| predicted protein [Populus trichocarpa] gi|222863947|gb|EEF01078.1|
           predicted protein [Populus trichocarpa]
          Length = 848

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
 Frame = -3

Query: 396 DPAHLMAYGLFG------HTSVKYEQKSFYTFIPQIELVESDGLSMLTATLAWDDSSLCL 235
           D  H+M YG          +S+K+E  SFY  IP++EL E +  S+L  TLAWD++S   
Sbjct: 147 DSTHIMTYGFMDINFNKESSSIKHEAGSFYFLIPEVELDEQEEASILVITLAWDENSCWT 206

Query: 234 YEEA---FDVIIYLTTALTRPVAMECLNKCVSAVLRKFNMVGDKHAQMVYTNALML--RD 70
           +E+A   F+  I   +    P    C +KC+ +  R FN++  K  QM  T+AL L  RD
Sbjct: 207 FEQAIQSFESSIDQASFCFWPDTERCYSKCIKSTFRNFNLMEAKTFQMACTDALFLDRRD 266

Query: 69  GRLEHMELEDASSSHQFSLR 10
            + +  EL D +    +SL+
Sbjct: 267 YQADTTELLDDAGETSYSLQ 286


>ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYLLO, chloroplastic-like
           [Vitis vinifera]
          Length = 1614

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 12/113 (10%)
 Frame = -3

Query: 399 IDPAHLMAYGLFG------HTSVKYEQKSFYTFIPQIELVESDGLSMLTATLAWDDSSLC 238
           ID   + AYG          +S+++E  SFY FIPQIEL E +G+S+L+ATLAW DS L 
Sbjct: 132 IDSTCVTAYGFMNANFNEESSSMRHEAGSFYIFIPQIELDEDEGISILSATLAWSDSPLS 191

Query: 237 LYEE---AFDVIIYLTTALTRPVAMEC---LNKCVSAVLRKFNMVGDKHAQMV 97
            +EE   ++++ +Y        V   C    +KC+ + LRKF++V D   +M+
Sbjct: 192 TFEESIHSYELSLY-------QVFXSCDHLYDKCIRSTLRKFDLVKDATFKML 237


>tpg|DAA34846.1| TPA_inf: chloroplast phylloquinone biosynthesis protein [Oryza
           sativa Japonica Group]
          Length = 1712

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 18/139 (12%)
 Frame = -3

Query: 366 FGHTSVKYEQK---------SFYTFIPQIELVESDGLSMLTATLAWDDS-------SLCL 235
           +G   VKY+++         SFY FIPQ+EL E DG SML++T+ WDDS       S+CL
Sbjct: 209 YGSVGVKYDKELLSLEERIGSFYFFIPQVELSEFDGYSMLSSTIVWDDSVSHTFEDSVCL 268

Query: 234 YEEAFDVIIYLTTALTRPVAMECLNKCVSAVLRKFNMVGDKHAQMVYTNA--LMLRDGRL 61
           +E  F  I     +     A  C    V++ + +  M   ++ Q+VY +A  L + DG+ 
Sbjct: 269 FESCFSQI----WSSYDSSATICYENMVTSYIGESRMSESRNTQLVYLDAEFLAVIDGKA 324

Query: 60  EHMELEDASSSHQFSLRLS 4
              E E+  +S Q  +R S
Sbjct: 325 V-TEKENCPTSDQSFVRFS 342


>ref|XP_002514555.1| menaquinone biosynthesis protein, putative [Ricinus communis]
           gi|223546159|gb|EEF47661.1| menaquinone biosynthesis
           protein, putative [Ricinus communis]
          Length = 1679

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
 Frame = -3

Query: 354 SVKYEQKSFYTFIPQIELVESDGLSMLTATLAWDDSSLCLYEEA---FDVIIYLTTALTR 184
           S+K E  SFY  +PQIEL E + +S+L+ATLAWDD+  C +++A   F+  IY  +    
Sbjct: 220 SIKNEAGSFYLVVPQIELHEHEDVSVLSATLAWDDAFFCTFKQAIQSFESSIYQASYHCW 279

Query: 183 PVAMECLNKCVSAVLRKFNMVGDKHAQMV 97
           P      + C+ + L K ++V D   QM+
Sbjct: 280 PTRDRIHSYCMRSALNKGSLVKDDTFQML 308


>emb|CBI27424.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
 Frame = -3

Query: 399 IDPAHLMAYGLFG------HTSVKYEQKSFYTFIPQIELVESDGLSMLTATLAWDDSSLC 238
           ID   + AYG          +S+++E  SFY FIPQIEL E +G+S+L+ATLAW DS L 
Sbjct: 146 IDSTCVTAYGFMNANFNEESSSMRHEAGSFYIFIPQIELDEDEGISILSATLAWSDSPLS 205

Query: 237 LYEE---AFDVIIYLTTALTRPVAMECLN 160
            +EE   ++++ +Y    + R +  +  N
Sbjct: 206 TFEESIHSYELSLYQRKLIRRKLFKDIRN 234


Top