BLASTX nr result

ID: Atractylodes22_contig00026928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026928
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527885.1| RNA binding protein, putative [Ricinus commu...   183   1e-44
ref|XP_002270830.2| PREDICTED: uncharacterized protein LOC100251...   179   2e-43
ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_003550888.1| PREDICTED: uncharacterized protein LOC100784...   163   2e-38
ref|XP_004170110.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   162   3e-38

>ref|XP_002527885.1| RNA binding protein, putative [Ricinus communis]
           gi|223532736|gb|EEF34516.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 715

 Score =  183 bits (465), Expect = 1e-44
 Identities = 86/127 (67%), Positives = 106/127 (83%)
 Frame = +2

Query: 41  KELSCGNFNVNDNVYSISTRGANKETLVLPNLKLNIIQEAIRIALEVVYRPHYSKISHGC 220
           +EL+ GNF+V+ N +SISTRG  KETLVLP LKL ++QEAIRI LEVVY+PH+S+ISHGC
Sbjct: 67  EELASGNFDVSANTFSISTRGVKKETLVLPKLKLKVVQEAIRIVLEVVYKPHFSRISHGC 126

Query: 221 RSGRGQSSALKYICKEISNPDWWFTLVLNKKVDDSMLAKLISTMGSKIEDHRLYAIIRSM 400
           RSGRG  +ALKYI KEISNPDWWFTL++NKK+D S++ KLIS +  KIED  LY I+R M
Sbjct: 127 RSGRGHHTALKYISKEISNPDWWFTLIINKKLDASVINKLISILEDKIEDPYLYDILRGM 186

Query: 401 FDAEILN 421
           +DA+ LN
Sbjct: 187 YDAQALN 193


>ref|XP_002270830.2| PREDICTED: uncharacterized protein LOC100251856 [Vitis vinifera]
          Length = 1440

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/134 (64%), Positives = 109/134 (81%)
 Frame = +2

Query: 20   IS*SNWEKELSCGNFNVNDNVYSISTRGANKETLVLPNLKLNIIQEAIRIALEVVYRPHY 199
            IS  +  +EL  G+FNVN N +SIST+ A KE L+LP+LKL ++QEAIRI LE+VYRP++
Sbjct: 783  ISFKSMAEELLGGSFNVNVNTFSISTKSARKEVLILPSLKLKVVQEAIRIVLEIVYRPYF 842

Query: 200  SKISHGCRSGRGQSSALKYICKEISNPDWWFTLVLNKKVDDSMLAKLISTMGSKIEDHRL 379
            SKISHGCRSGRG S+ALKYI KEISNPDWWF L +NKK+D  +LAKLISTM  KIED  L
Sbjct: 843  SKISHGCRSGRGHSTALKYISKEISNPDWWFILHVNKKLDAVVLAKLISTMQDKIEDPNL 902

Query: 380  YAIIRSMFDAEILN 421
            + +I++MF A++LN
Sbjct: 903  FVMIQNMFHAQVLN 916


>ref|XP_002306252.1| predicted protein [Populus trichocarpa] gi|222855701|gb|EEE93248.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  177 bits (448), Expect = 1e-42
 Identities = 85/134 (63%), Positives = 107/134 (79%)
 Frame = +2

Query: 20  IS*SNWEKELSCGNFNVNDNVYSISTRGANKETLVLPNLKLNIIQEAIRIALEVVYRPHY 199
           IS  + EKELS G F+V  N +SI+T+GA  E LVLP LKL ++QEAIRI LEVVYRP++
Sbjct: 85  ISFESMEKELSGGCFDVGGNTFSIATKGARNEILVLPKLKLKVVQEAIRIVLEVVYRPYF 144

Query: 200 SKISHGCRSGRGQSSALKYICKEISNPDWWFTLVLNKKVDDSMLAKLISTMGSKIEDHRL 379
           SKISHGCRSGRG  SALKYI K+ISNPDWWFTL++++K+D  +L KL S MG KI+D  L
Sbjct: 145 SKISHGCRSGRGHHSALKYITKDISNPDWWFTLIISRKLDTCILNKLFSIMGEKIQDPCL 204

Query: 380 YAIIRSMFDAEILN 421
           + +I+ MFDA++LN
Sbjct: 205 FDMIQGMFDAQVLN 218


>ref|XP_003550888.1| PREDICTED: uncharacterized protein LOC100784683 [Glycine max]
          Length = 739

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/129 (62%), Positives = 103/129 (79%), Gaps = 2/129 (1%)
 Frame = +2

Query: 41  KELSCGNFNVNDNVYSISTR--GANKETLVLPNLKLNIIQEAIRIALEVVYRPHYSKISH 214
           +EL   +F+V  N  S STR   ANKE LVLPNLKL ++QEA+RIALEVVY+P++SKISH
Sbjct: 88  EELGKRDFDVCANTSSFSTRRGSANKEVLVLPNLKLRVVQEAMRIALEVVYKPYFSKISH 147

Query: 215 GCRSGRGQSSALKYICKEISNPDWWFTLVLNKKVDDSMLAKLISTMGSKIEDHRLYAIIR 394
           GCRSGRG+++ALKY+CK + +PDWWFT+++ KK+D ++L K+IS M  KIED  LY  IR
Sbjct: 148 GCRSGRGRAAALKYVCKGVLSPDWWFTMLVVKKLDAAVLEKMISIMEDKIEDPCLYDFIR 207

Query: 395 SMFDAEILN 421
           SMFDA +LN
Sbjct: 208 SMFDARVLN 216


>ref|XP_004170110.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228745 [Cucumis sativus]
          Length = 711

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/134 (59%), Positives = 106/134 (79%)
 Frame = +2

Query: 20  IS*SNWEKELSCGNFNVNDNVYSISTRGANKETLVLPNLKLNIIQEAIRIALEVVYRPHY 199
           IS  +  +ELS GNF+VN N +SI +  + KE L+LP +KL ++QEAIRI LE V+RPH+
Sbjct: 60  ISFESMAEELSNGNFDVNTNTFSILS--SRKEVLILPKIKLKVLQEAIRIVLECVFRPHF 117

Query: 200 SKISHGCRSGRGQSSALKYICKEISNPDWWFTLVLNKKVDDSMLAKLISTMGSKIEDHRL 379
           SKISHGCRSGRG S+ALKYI KEI +PDWWFT+ L+KK+D+ ++AKLI+ M  KIED +L
Sbjct: 118 SKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKL 177

Query: 380 YAIIRSMFDAEILN 421
           +A+IRS++ A  LN
Sbjct: 178 FAVIRSIYLAGALN 191


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