BLASTX nr result

ID: Atractylodes22_contig00026920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026920
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcr...    74   1e-11
ref|XP_002306575.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002302293.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
gb|ABK94120.1| unknown [Populus trichocarpa]                           73   2e-11
ref|XP_002334472.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
          Length = 293

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/83 (53%), Positives = 59/83 (71%)
 Frame = +1

Query: 10  VLEPSWQWKDMTPINNPPNPSLFNQSI*SGVVAGGAKPIKTMSRFGQSGTSADDLFPLFD 189
           VL  S++  D+T +  P  P+L   S+   ++A  + P  +  RF  +GT+ADDLFPLF+
Sbjct: 20  VLNISFREGDLT-LAPPAPPTLPTLSLPLSLIASFSYP--SPPRF--TGTTADDLFPLFE 74

Query: 190 KYGKVVDVFIPRDRRTGESRGFA 258
           +YGKVVDVFIPRDRRTG+SRGFA
Sbjct: 75  RYGKVVDVFIPRDRRTGDSRGFA 97


>ref|XP_002306575.1| predicted protein [Populus trichocarpa] gi|222856024|gb|EEE93571.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/60 (65%), Positives = 41/60 (68%), Gaps = 18/60 (30%)
 Frame = +1

Query: 133 MSRFGQSG------------------TSADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 258
           MS FG+SG                  T+ADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA
Sbjct: 1   MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60


>ref|XP_002302293.1| predicted protein [Populus trichocarpa] gi|222844019|gb|EEE81566.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/60 (65%), Positives = 41/60 (68%), Gaps = 18/60 (30%)
 Frame = +1

Query: 133 MSRFGQSG------------------TSADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 258
           MS FG+SG                  T+ADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA
Sbjct: 1   MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60


>gb|ABK94120.1| unknown [Populus trichocarpa]
          Length = 302

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/60 (65%), Positives = 41/60 (68%), Gaps = 18/60 (30%)
 Frame = +1

Query: 133 MSRFGQSG------------------TSADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 258
           MS FG+SG                  T+ADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA
Sbjct: 1   MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60


>ref|XP_002334472.1| predicted protein [Populus trichocarpa] gi|222872360|gb|EEF09491.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/60 (63%), Positives = 41/60 (68%), Gaps = 18/60 (30%)
 Frame = +1

Query: 133 MSRFGQSG------------------TSADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 258
           MS FG+SG                  T+ADDLFPLFDKYGKVVD+FIPRDRRTGESRGFA
Sbjct: 1   MSHFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60


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