BLASTX nr result
ID: Atractylodes22_contig00026920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00026920 (258 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcr... 74 1e-11 ref|XP_002306575.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 ref|XP_002302293.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 gb|ABK94120.1| unknown [Populus trichocarpa] 73 2e-11 ref|XP_002334472.1| predicted protein [Populus trichocarpa] gi|2... 73 3e-11 >gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays] Length = 293 Score = 74.3 bits (181), Expect = 1e-11 Identities = 44/83 (53%), Positives = 59/83 (71%) Frame = +1 Query: 10 VLEPSWQWKDMTPINNPPNPSLFNQSI*SGVVAGGAKPIKTMSRFGQSGTSADDLFPLFD 189 VL S++ D+T + P P+L S+ ++A + P + RF +GT+ADDLFPLF+ Sbjct: 20 VLNISFREGDLT-LAPPAPPTLPTLSLPLSLIASFSYP--SPPRF--TGTTADDLFPLFE 74 Query: 190 KYGKVVDVFIPRDRRTGESRGFA 258 +YGKVVDVFIPRDRRTG+SRGFA Sbjct: 75 RYGKVVDVFIPRDRRTGDSRGFA 97 >ref|XP_002306575.1| predicted protein [Populus trichocarpa] gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa] Length = 101 Score = 73.2 bits (178), Expect = 2e-11 Identities = 39/60 (65%), Positives = 41/60 (68%), Gaps = 18/60 (30%) Frame = +1 Query: 133 MSRFGQSG------------------TSADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 258 MS FG+SG T+ADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60 >ref|XP_002302293.1| predicted protein [Populus trichocarpa] gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa] Length = 178 Score = 73.2 bits (178), Expect = 2e-11 Identities = 39/60 (65%), Positives = 41/60 (68%), Gaps = 18/60 (30%) Frame = +1 Query: 133 MSRFGQSG------------------TSADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 258 MS FG+SG T+ADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60 >gb|ABK94120.1| unknown [Populus trichocarpa] Length = 302 Score = 73.2 bits (178), Expect = 2e-11 Identities = 39/60 (65%), Positives = 41/60 (68%), Gaps = 18/60 (30%) Frame = +1 Query: 133 MSRFGQSG------------------TSADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 258 MS FG+SG T+ADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60 >ref|XP_002334472.1| predicted protein [Populus trichocarpa] gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa] Length = 101 Score = 72.8 bits (177), Expect = 3e-11 Identities = 38/60 (63%), Positives = 41/60 (68%), Gaps = 18/60 (30%) Frame = +1 Query: 133 MSRFGQSG------------------TSADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 258 MS FG+SG T+ADDLFPLFDKYGKVVD+FIPRDRRTGESRGFA Sbjct: 1 MSHFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60