BLASTX nr result

ID: Atractylodes22_contig00026906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026906
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   630   e-178
ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glyc...   608   e-172
ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic su...   604   e-170
ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   597   e-168
ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|2...   593   e-167

>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
            gi|296088521|emb|CBI37512.3| unnamed protein product
            [Vitis vinifera]
          Length = 1089

 Score =  630 bits (1626), Expect = e-178
 Identities = 306/380 (80%), Positives = 334/380 (87%)
 Frame = -3

Query: 1142 KHHATXXXXXXXXXXXXXXXXENLVDEDELILRDMEDCEALATRLEKWKRPVLCTGYQSQ 963
            KH A+                E L+ EDE ILRD+ED  ALA+RL KW RP L + Y S 
Sbjct: 24   KHQASSSPLAEEDLDEDVFLEETLILEDEHILRDIEDRRALASRLSKWARPPLSSAYLSS 83

Query: 962  SEKIVFQQLEIDYVVGESHKELIPSSSGPAAIIRIFGVTMEGNSVCCNVHGFEPYFYISC 783
            S+ IVFQQLEIDYV+GESHKEL+P+SSG AAIIRIFGVT EG+SVCCNVHGFEPYFYISC
Sbjct: 84   SQSIVFQQLEIDYVIGESHKELMPNSSGSAAIIRIFGVTREGHSVCCNVHGFEPYFYISC 143

Query: 782  PPGMGPDDISRFHQILEGRMREVNRNNRAPKFIHRIELVQKRSIMYYQQHSSQPFLKIVV 603
            PPGMGPDDISRFHQ+LEGRMREVNRN+R PKF+ RIE+VQKRSIMYYQ  SS PFLKIVV
Sbjct: 144  PPGMGPDDISRFHQVLEGRMREVNRNSRVPKFVRRIEMVQKRSIMYYQLQSSHPFLKIVV 203

Query: 602  ALPTMVSSCRGILDKGIQIDGLGMKSFMTYESNVLFVLRFMIDCKIVGGNWIEVPAHKYK 423
            ALPTMV+SCRGILD+GIQI+G GMK+F+TYESNVLF LRFM+DC IVGGNWIEVPA KYK
Sbjct: 204  ALPTMVTSCRGILDRGIQIEGFGMKNFVTYESNVLFALRFMVDCNIVGGNWIEVPAGKYK 263

Query: 422  KTARNLSYSQLEFDCLYSELISHVPEGEFSKMAPFRILSFDIECAGRKGLFPEPTHDPVI 243
            KTA+NLSY QLEFDCLYSEL SH+PEGEFSKMAPFRILSFDIECAGRKG FPEPTHDPVI
Sbjct: 264  KTAKNLSYCQLEFDCLYSELTSHIPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVI 323

Query: 242  QIANLVTLQGEEQPFVRNVMTLKSCSPIVGVDVMSFDTEREVLLAWRDFIREIDPDILIG 63
            Q+ANLVTLQGE+QPFVRNVMTLKSCSPIVGVDVMSF+TEREVLLAWRDFIRE+DPDI+IG
Sbjct: 324  QVANLVTLQGEDQPFVRNVMTLKSCSPIVGVDVMSFETEREVLLAWRDFIREVDPDIIIG 383

Query: 62   YNICKFDLPYLIQRAETLGI 3
            YNICKFDLPYLI+RA  LGI
Sbjct: 384  YNICKFDLPYLIERASVLGI 403


>ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
            gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA
            polymerase delta catalytic subunit
            gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine
            max]
          Length = 1088

 Score =  608 bits (1568), Expect = e-172
 Identities = 290/355 (81%), Positives = 319/355 (89%)
 Frame = -3

Query: 1067 DEDELILRDMEDCEALATRLEKWKRPVLCTGYQSQSEKIVFQQLEIDYVVGESHKELIPS 888
            DE+ LILRD+E  +ALA RL KW RP L  GY +QS  ++FQQLEIDYV+ ESH EL+P+
Sbjct: 22   DEESLILRDIEQRQALANRLSKWTRPPLSAGYVAQSRSVLFQQLEIDYVIAESHGELLPN 81

Query: 887  SSGPAAIIRIFGVTMEGNSVCCNVHGFEPYFYISCPPGMGPDDISRFHQILEGRMREVNR 708
            SSGP AIIRIFGVT EG+SVCCNVHGFEPYFYI CPPGMGPDDIS FHQ LEGRMRE NR
Sbjct: 82   SSGPVAIIRIFGVTKEGHSVCCNVHGFEPYFYICCPPGMGPDDISHFHQTLEGRMREANR 141

Query: 707  NNRAPKFIHRIELVQKRSIMYYQQHSSQPFLKIVVALPTMVSSCRGILDKGIQIDGLGMK 528
            N+   KF+ RIE+VQ+RSIMYYQQ +SQPFLKIVVALPTMV+SCRGILD+GIQ+DGLGMK
Sbjct: 142  NSNVGKFVRRIEMVQRRSIMYYQQSNSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMK 201

Query: 527  SFMTYESNVLFVLRFMIDCKIVGGNWIEVPAHKYKKTARNLSYSQLEFDCLYSELISHVP 348
            SF+TYESNVLF LRFMIDC IVGGNWI +PA KYKKTA++LSY QLEFDCLYSELISH P
Sbjct: 202  SFLTYESNVLFALRFMIDCNIVGGNWIGIPAGKYKKTAKSLSYCQLEFDCLYSELISHAP 261

Query: 347  EGEFSKMAPFRILSFDIECAGRKGLFPEPTHDPVIQIANLVTLQGEEQPFVRNVMTLKSC 168
            EGE+SKMAPFRILSFDIECAGRKG FPEPTHDPVIQIANLVTLQGE+QPF+RNVMTLKSC
Sbjct: 262  EGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGEDQPFIRNVMTLKSC 321

Query: 167  SPIVGVDVMSFDTEREVLLAWRDFIREIDPDILIGYNICKFDLPYLIQRAETLGI 3
            SPIVGVDVM F+TEREVLLAWRDFIRE+DPDI+IGYNICKFDLPYLI+RA  L I
Sbjct: 322  SPIVGVDVMPFETEREVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERALNLKI 376


>ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
            sativus]
          Length = 1086

 Score =  604 bits (1558), Expect = e-170
 Identities = 299/402 (74%), Positives = 333/402 (82%), Gaps = 1/402 (0%)
 Frame = -3

Query: 1205 MNKGNGRK-RXXXXXXXXXXXPKHHATXXXXXXXXXXXXXXXXENLVDEDELILRDMEDC 1029
            MN GN RK R           PKH A                  +L+DED LILRD+E+ 
Sbjct: 1    MNNGNARKSRPPPHHPSPAPPPKHQALSQEEDFVDEDVFLDE--SLLDEDALILRDIEER 58

Query: 1028 EALATRLEKWKRPVLCTGYQSQSEKIVFQQLEIDYVVGESHKELIPSSSGPAAIIRIFGV 849
            +ALA+R+ KW RP L   Y SQS+ IVFQQLEIDYV+GESHKEL+P+ SGPAAI+RIFGV
Sbjct: 59   QALASRISKWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGPAAILRIFGV 118

Query: 848  TMEGNSVCCNVHGFEPYFYISCPPGMGPDDISRFHQILEGRMREVNRNNRAPKFIHRIEL 669
            T EG+SVCC+VHGFEPYFYISCP GMGPDDIS FH+ LE RM+EVNRNN+AP F+ RIEL
Sbjct: 119  TREGHSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNKAPNFVRRIEL 178

Query: 668  VQKRSIMYYQQHSSQPFLKIVVALPTMVSSCRGILDKGIQIDGLGMKSFMTYESNVLFVL 489
            VQ+RSIMYYQQ + Q FLKIVVALPTMV+SCRGILD+GIQI+G GMKSFMTYESNVLF L
Sbjct: 179  VQRRSIMYYQQQTFQSFLKIVVALPTMVTSCRGILDRGIQIEGFGMKSFMTYESNVLFAL 238

Query: 488  RFMIDCKIVGGNWIEVPAHKYKKTARNLSYSQLEFDCLYSELISHVPEGEFSKMAPFRIL 309
            RFMIDC +VGGNWIEVP  KYKKT R+LSY QLEFDCLYS+LISH PEGEFSKMAPFRIL
Sbjct: 239  RFMIDCNVVGGNWIEVPVGKYKKTVRSLSYCQLEFDCLYSDLISHAPEGEFSKMAPFRIL 298

Query: 308  SFDIECAGRKGLFPEPTHDPVIQIANLVTLQGEEQPFVRNVMTLKSCSPIVGVDVMSFDT 129
            SFDIECAGRKG FPEPT DPVIQ+ANLVTLQGE+QPFVRNVMTL +CSPI GVDV+SFDT
Sbjct: 299  SFDIECAGRKGHFPEPTQDPVIQVANLVTLQGEDQPFVRNVMTLNTCSPIAGVDVLSFDT 358

Query: 128  EREVLLAWRDFIREIDPDILIGYNICKFDLPYLIQRAETLGI 3
            ER+VLLAWRD IRE+DPDI+IGYNICKFDLPYLI+RAE L I
Sbjct: 359  ERDVLLAWRDLIREVDPDIIIGYNICKFDLPYLIERAEALKI 400


>ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
            subunit-like [Cucumis sativus]
          Length = 573

 Score =  597 bits (1539), Expect = e-168
 Identities = 296/402 (73%), Positives = 330/402 (82%), Gaps = 1/402 (0%)
 Frame = -3

Query: 1205 MNKGNGRK-RXXXXXXXXXXXPKHHATXXXXXXXXXXXXXXXXENLVDEDELILRDMEDC 1029
            MN GN RK R           PKH A                  +L+DED LILRD+E+ 
Sbjct: 1    MNNGNARKSRPPPHHPSPAPPPKHQALSQEEDFVDEDVFLDE--SLLDEDALILRDIEER 58

Query: 1028 EALATRLEKWKRPVLCTGYQSQSEKIVFQQLEIDYVVGESHKELIPSSSGPAAIIRIFGV 849
            +ALA+R+ KW RP L   Y SQS+ IVFQQLEIDYV+GESHKEL+P+ SGPAAI+RIFGV
Sbjct: 59   QALASRISKWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGPAAILRIFGV 118

Query: 848  TMEGNSVCCNVHGFEPYFYISCPPGMGPDDISRFHQILEGRMREVNRNNRAPKFIHRIEL 669
            T EG+SVCC+VHGFEPYFYISCP GMGPDDIS FH+ LE RM+EVNRNN+AP F+ RIEL
Sbjct: 119  TREGHSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNKAPNFVRRIEL 178

Query: 668  VQKRSIMYYQQHSSQPFLKIVVALPTMVSSCRGILDKGIQIDGLGMKSFMTYESNVLFVL 489
            VQ+RSIMYYQQ + Q FLKIVVALPTMV+SCRGILD+GIQI+G GMKSFMTYESNV F L
Sbjct: 179  VQRRSIMYYQQQTFQSFLKIVVALPTMVTSCRGILDRGIQIEGFGMKSFMTYESNVXFAL 238

Query: 488  RFMIDCKIVGGNWIEVPAHKYKKTARNLSYSQLEFDCLYSELISHVPEGEFSKMAPFRIL 309
            RFMIDC +VGGNWIEVP  KYKK  R+LSY QLEFDCLYS+LISH  EGEFSKMAPFRIL
Sbjct: 239  RFMIDCNVVGGNWIEVPVGKYKKXVRSLSYCQLEFDCLYSDLISHAXEGEFSKMAPFRIL 298

Query: 308  SFDIECAGRKGLFPEPTHDPVIQIANLVTLQGEEQPFVRNVMTLKSCSPIVGVDVMSFDT 129
            SFDIECAGRKG FPEPT DPVIQ+ANLVTLQGE+QPFVRNVMTL +CSPI GVDV+SFDT
Sbjct: 299  SFDIECAGRKGHFPEPTQDPVIQVANLVTLQGEDQPFVRNVMTLNTCSPIAGVDVLSFDT 358

Query: 128  EREVLLAWRDFIREIDPDILIGYNICKFDLPYLIQRAETLGI 3
            ER+VLLAWRD IRE+DPDI+IGYNICKFDLPYLI+RAE L I
Sbjct: 359  ERDVLLAWRDLIREVDPDIIIGYNICKFDLPYLIERAEALKI 400


>ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|222856491|gb|EEE94038.1|
            predicted protein [Populus trichocarpa]
          Length = 1081

 Score =  593 bits (1530), Expect = e-167
 Identities = 285/357 (79%), Positives = 316/357 (88%)
 Frame = -3

Query: 1073 LVDEDELILRDMEDCEALATRLEKWKRPVLCTGYQSQSEKIVFQQLEIDYVVGESHKELI 894
            L+ EDE  L   ++ + L +RL KW RP L  GY SQS+ I+FQQLEIDYV+GE+HKEL+
Sbjct: 41   LIAEDEENLN--KERQVLTSRLSKWARPKLSDGYVSQSQSIIFQQLEIDYVIGETHKELL 98

Query: 893  PSSSGPAAIIRIFGVTMEGNSVCCNVHGFEPYFYISCPPGMGPDDISRFHQILEGRMREV 714
            P  SG AAI+RIFGVT EG+SVCC VHGFEPYFY+SCPPGM PDDIS FH+ILEG+MREV
Sbjct: 99   PDRSGSAAILRIFGVTGEGHSVCCLVHGFEPYFYVSCPPGMNPDDISHFHKILEGKMREV 158

Query: 713  NRNNRAPKFIHRIELVQKRSIMYYQQHSSQPFLKIVVALPTMVSSCRGILDKGIQIDGLG 534
            NRN + PKF+ RIELV KRSIMYYQQ  S PFLKIVVALPTMVS CRGILDKGIQIDGLG
Sbjct: 159  NRNTKVPKFVRRIELVHKRSIMYYQQQQSHPFLKIVVALPTMVSGCRGILDKGIQIDGLG 218

Query: 533  MKSFMTYESNVLFVLRFMIDCKIVGGNWIEVPAHKYKKTARNLSYSQLEFDCLYSELISH 354
            M+SFMTYESNVLF LRFMIDC +VGGNWIEVPA KYKKT+++LS  QLEFDCLYSELISH
Sbjct: 219  MRSFMTYESNVLFALRFMIDCNVVGGNWIEVPAGKYKKTSKSLSNCQLEFDCLYSELISH 278

Query: 353  VPEGEFSKMAPFRILSFDIECAGRKGLFPEPTHDPVIQIANLVTLQGEEQPFVRNVMTLK 174
              EGEFSKMAPFRILSFDIECAGRKG FPEPTHDPVIQ+ANLVTLQGE+QPFVRN+MTL 
Sbjct: 279  AAEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQGEDQPFVRNIMTLN 338

Query: 173  SCSPIVGVDVMSFDTEREVLLAWRDFIREIDPDILIGYNICKFDLPYLIQRAETLGI 3
            SCSPIVGVDVMSFDTEREVL+AW++FIRE+DPDI+IGYNICKFDLPYLI+RA TLGI
Sbjct: 339  SCSPIVGVDVMSFDTEREVLIAWKEFIREVDPDIIIGYNICKFDLPYLIERAATLGI 395


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