BLASTX nr result

ID: Atractylodes22_contig00026882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026882
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c...   237   2e-60
ref|XP_002518855.1| structural constituent of ribosome, putative...   234   2e-59
ref|XP_002886339.1| ribosomal protein S6 family protein [Arabido...   234   2e-59
gb|AFK44002.1| unknown [Lotus japonicus]                              230   3e-58
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin...   230   3e-58

>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
           vinifera]
          Length = 199

 Score =  237 bits (605), Expect = 2e-60
 Identities = 126/193 (65%), Positives = 146/193 (75%), Gaps = 5/193 (2%)
 Frame = +1

Query: 76  SSLLASRPLLQTLGPFTKNNLLSFA--YNHQTKRNPFQGFSVKAQTLDFSXXXXXXXXXX 249
           SSLL+     Q+  P T   + S    + +  +R P  G S++A TLDFS          
Sbjct: 9   SSLLSRFSSAQSSPPITSFTVFSGKQRFIYHPRRAP--GLSIRALTLDFSGSFFEGGFGS 66

Query: 250 XXXQNTPP---TTAVEEKEEPQCPPGLRQYETMAVLRPDMSEDDRISLTEKYEELLVAGG 420
               N+PP     AVE+K+EPQCPPGLRQYETMAVLRPDMSED+R++LT+KYEELLVAGG
Sbjct: 67  DDDPNSPPGPGIAAVEDKDEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGG 126

Query: 421 GMYVEVFNRGVLPLAYSIKKKNKAGETNTYLDGIYILFTYFTKPESLEALETTLKMDDDV 600
           GMYVEVFNRGV+PLAYSIKKKNKAGE+NTYLDGIY+LFTYFTKPES+E LE TL  DDDV
Sbjct: 127 GMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLLFTYFTKPESMEVLEATLTADDDV 186

Query: 601 IRSSTFKIRKRKY 639
           IRSS+FKIRKRKY
Sbjct: 187 IRSSSFKIRKRKY 199


>ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223541842|gb|EEF43388.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 205

 Score =  234 bits (597), Expect = 2e-59
 Identities = 130/204 (63%), Positives = 150/204 (73%), Gaps = 13/204 (6%)
 Frame = +1

Query: 67  ASCSSLLA------SRPLLQTL-GPFTKNNLLSFAYNHQTKRNPFQGFSVKAQTLDFSXX 225
           +SCSS L       S PL   L   F     LSFA+  + KR+  +  ++K+Q LDFS  
Sbjct: 5   SSCSSSLLTPTVINSSPLCPKLFSKFPCFPSLSFAHTIK-KRHSVRSLTIKSQALDFSGS 63

Query: 226 XXXXXXXXXXXQNTPPT------TAVEEKEEPQCPPGLRQYETMAVLRPDMSEDDRISLT 387
                      +  PPT      TAVE+KE PQCPPGLRQYETMAVLRPDMSED+R++LT
Sbjct: 64  FYEGSGFGS--EEDPPTLTGSGMTAVEDKEPPQCPPGLRQYETMAVLRPDMSEDERLALT 121

Query: 388 EKYEELLVAGGGMYVEVFNRGVLPLAYSIKKKNKAGETNTYLDGIYILFTYFTKPESLEA 567
           +KYEELLVAGGGMYVEVFNRGV+PLAYSIKKKNKAGETNTYLDGIY+LFTYFTKPES+E 
Sbjct: 122 QKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEM 181

Query: 568 LETTLKMDDDVIRSSTFKIRKRKY 639
           LE TL  DDD+IRSS+FKIRKRK+
Sbjct: 182 LEATLNTDDDIIRSSSFKIRKRKF 205


>ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297332180|gb|EFH62598.1| ribosomal protein S6
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 211

 Score =  234 bits (596), Expect = 2e-59
 Identities = 124/193 (64%), Positives = 148/193 (76%), Gaps = 8/193 (4%)
 Frame = +1

Query: 85  LASRPLLQ---TLGPF-TKNNLLSFAYNHQTKRNPFQGFSVKAQTLDFSXXXXXXXXXXX 252
           ++S+PLL    +L PF +K+  +  +   Q KR+  Q F VK+Q LDFS           
Sbjct: 19  VSSQPLLSFSHSLRPFISKSKPICASLQQQQKRDGSQ-FVVKSQALDFSGTFFEGGFGSD 77

Query: 253 XXQNTPP----TTAVEEKEEPQCPPGLRQYETMAVLRPDMSEDDRISLTEKYEELLVAGG 420
               +PP    +TA+E+K EPQCPPGLRQYETMAVLRPDMSED+R+ LT+KYEELLVAGG
Sbjct: 78  DDPTSPPGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGG 137

Query: 421 GMYVEVFNRGVLPLAYSIKKKNKAGETNTYLDGIYILFTYFTKPESLEALETTLKMDDDV 600
           GMYVEVFNRGV+PLAYSI+KKNKAGETNTYLDGIY+LFTYFTKPES+  LET L  DDD+
Sbjct: 138 GMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESITPLETVLTADDDI 197

Query: 601 IRSSTFKIRKRKY 639
           IRSS+FKI+KRKY
Sbjct: 198 IRSSSFKIKKRKY 210


>gb|AFK44002.1| unknown [Lotus japonicus]
          Length = 209

 Score =  230 bits (587), Expect = 3e-58
 Identities = 116/152 (76%), Positives = 129/152 (84%), Gaps = 2/152 (1%)
 Frame = +1

Query: 190 SVKAQTLDFSXXXXXXXXXXXXXQNTPPT--TAVEEKEEPQCPPGLRQYETMAVLRPDMS 363
           SVKAQTLDF+              N+  T  TA EEKEEPQCPPGLRQYETMAVLRPDMS
Sbjct: 58  SVKAQTLDFTDSFFEGGLGSEDDLNSSGTGLTATEEKEEPQCPPGLRQYETMAVLRPDMS 117

Query: 364 EDDRISLTEKYEELLVAGGGMYVEVFNRGVLPLAYSIKKKNKAGETNTYLDGIYILFTYF 543
           ED+R++LT+KYEELLVAGGGMYVEVFNRGV+PLAYSIKKKNKAGETNTYLDGIY+L+TYF
Sbjct: 118 EDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLYTYF 177

Query: 544 TKPESLEALETTLKMDDDVIRSSTFKIRKRKY 639
           TKPES+ ALE TL  DDDV+RS+TFKI+KRKY
Sbjct: 178 TKPESIVALEETLLADDDVLRSTTFKIKKRKY 209


>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
           gi|255628961|gb|ACU14825.1| unknown [Glycine max]
          Length = 214

 Score =  230 bits (586), Expect = 3e-58
 Identities = 120/182 (65%), Positives = 141/182 (77%), Gaps = 6/182 (3%)
 Frame = +1

Query: 112 LGPFTKNNLLSFA---YNHQTKRNPFQGFSVKAQTLDFSXXXXXXXXXXXXXQNTPPT-- 276
           +G F++     FA   ++   KRN + GFS++AQTLDFS              ++P    
Sbjct: 34  IGAFSRTPKTLFAESRFHFHPKRNDY-GFSIRAQTLDFSDSFFEGGFGSEDVPSSPGGPG 92

Query: 277 -TAVEEKEEPQCPPGLRQYETMAVLRPDMSEDDRISLTEKYEELLVAGGGMYVEVFNRGV 453
            TAVEEKEEPQCPPGLRQYETM VLRPDMSED+R++LT+KYEE+LVAGGGMYVEVFNRGV
Sbjct: 93  FTAVEEKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGV 152

Query: 454 LPLAYSIKKKNKAGETNTYLDGIYILFTYFTKPESLEALETTLKMDDDVIRSSTFKIRKR 633
           +PLAYSIKKKNKAGETNTYLDGIY+LFTYFTKPES+  LE T+  DD+VIRS + KIRKR
Sbjct: 153 IPLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKR 212

Query: 634 KY 639
           KY
Sbjct: 213 KY 214


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