BLASTX nr result

ID: Atractylodes22_contig00026851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026851
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein lig...   109   1e-28
emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]   109   2e-27
ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   100   2e-25
gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japo...    97   6e-25
gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indi...    97   6e-25

>ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera] gi|298204453|emb|CBI16933.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  109 bits (273), Expect(2) = 1e-28
 Identities = 50/54 (92%), Positives = 51/54 (94%)
 Frame = -3

Query: 503 YAWYPSPIDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFSLADCVTPWNASMI 342
           YAWYPSPIDWCVGEVR+LAAGGGHSAVLTDACSLKELCEF LADCVTP NAS I
Sbjct: 382 YAWYPSPIDWCVGEVRQLAAGGGHSAVLTDACSLKELCEFRLADCVTPSNASEI 435



 Score = 42.0 bits (97), Expect(2) = 1e-28
 Identities = 20/25 (80%), Positives = 20/25 (80%)
 Frame = -2

Query: 273 DVAYRTGSDALVRLCERLRERPPDD 199
           DVA RTGSDAL RLCERLRE  P D
Sbjct: 437 DVASRTGSDALARLCERLREHLPHD 461


>emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]
          Length = 461

 Score =  109 bits (273), Expect(2) = 2e-27
 Identities = 50/54 (92%), Positives = 51/54 (94%)
 Frame = -3

Query: 503 YAWYPSPIDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFSLADCVTPWNASMI 342
           YAWYPSPIDWCVGEVR+LAAGGGHSAVLTDACSLKELCEF LADCVTP NAS I
Sbjct: 382 YAWYPSPIDWCVGEVRQLAAGGGHSAVLTDACSLKELCEFRLADCVTPSNASEI 435



 Score = 37.7 bits (86), Expect(2) = 2e-27
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = -2

Query: 273 DVAYRTGSDALVRLCERLRER 211
           DVA RTGSDAL RLCERLR R
Sbjct: 437 DVASRTGSDALARLCERLRYR 457


>ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 474

 Score =  100 bits (249), Expect(2) = 2e-25
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = -3

Query: 503 YAWYPSPIDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFSLADCVTPWNASMI 342
           YAWYPSP+DWCVGEVRKLAAGGGHSAVLTDACSLKELCEF LAD +T  NA+ +
Sbjct: 382 YAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFVLADSMTLSNAAKV 435



 Score = 40.4 bits (93), Expect(2) = 2e-25
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -2

Query: 273 DVAYRTGSDALVRLCERLRE 214
           D+AYRTGSDALVRLC RLRE
Sbjct: 437 DIAYRTGSDALVRLCGRLRE 456


>gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japonica Group]
          Length = 581

 Score = 97.1 bits (240), Expect(2) = 6e-25
 Identities = 43/54 (79%), Positives = 48/54 (88%)
 Frame = -3

Query: 503 YAWYPSPIDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFSLADCVTPWNASMI 342
           YAW+PSP+DWCVGEVR+LAAGGGHSAVLTDACSLKELCEF LA+ V   NA +I
Sbjct: 484 YAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETVNMSNALLI 537



 Score = 42.0 bits (97), Expect(2) = 6e-25
 Identities = 20/34 (58%), Positives = 23/34 (67%)
 Frame = -2

Query: 273 DVAYRTGSDALVRLCERLRERPPDDGICDC*TNQ 172
           DVA RTG DAL RLCE+LRE   + G C+   NQ
Sbjct: 539 DVASRTGGDALARLCEKLREHLVEQGECELLENQ 572


>gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
          Length = 555

 Score = 97.1 bits (240), Expect(2) = 6e-25
 Identities = 43/54 (79%), Positives = 48/54 (88%)
 Frame = -3

Query: 503 YAWYPSPIDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFSLADCVTPWNASMI 342
           YAW+PSP+DWCVGEVR+LAAGGGHSAVLTDACSLKELCEF LA+ V   NA +I
Sbjct: 458 YAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETVNMSNALLI 511



 Score = 42.0 bits (97), Expect(2) = 6e-25
 Identities = 20/34 (58%), Positives = 23/34 (67%)
 Frame = -2

Query: 273 DVAYRTGSDALVRLCERLRERPPDDGICDC*TNQ 172
           DVA RTG DAL RLCE+LRE   + G C+   NQ
Sbjct: 513 DVASRTGGDALARLCEKLREHLVEQGECELLENQ 546


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