BLASTX nr result

ID: Atractylodes22_contig00026818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026818
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511894.1| zinc finger protein, putative [Ricinus commu...    56   3e-06
ref|NP_191705.1| brassinosteroid-responsive RING-H2 [Arabidopsis...    56   3e-06
ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    55   6e-06
ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...    55   8e-06
ref|XP_002302597.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002511894.1| zinc finger protein, putative [Ricinus communis]
           gi|223549074|gb|EEF50563.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 171

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -1

Query: 112 MGFPVGYTELFLPKLLIQVLTFLGLIRNVISVIFRFV 2
           MGFPVGYTE+FLPKL +  L+FLG IRN+I   F F+
Sbjct: 1   MGFPVGYTEVFLPKLFVHTLSFLGFIRNIILCFFNFL 37


>ref|NP_191705.1| brassinosteroid-responsive RING-H2 [Arabidopsis thaliana]
           gi|297820998|ref|XP_002878382.1|
           brassinosteroid-responsive ring-H2 [Arabidopsis lyrata
           subsp. lyrata] gi|4689366|gb|AAD27870.1|AF134155_1 BRH1
           RING finger protein [Arabidopsis thaliana]
           gi|6850837|emb|CAB71076.1| RING finger protein
           [Arabidopsis thaliana] gi|17644157|gb|AAL38776.1|
           putative RING finger protein [Arabidopsis thaliana]
           gi|21436189|gb|AAM51382.1| putative RING finger protein
           [Arabidopsis thaliana] gi|21554590|gb|AAM63625.1| RING
           finger protein [Arabidopsis thaliana]
           gi|297324220|gb|EFH54641.1| brassinosteroid-responsive
           ring-H2 [Arabidopsis lyrata subsp. lyrata]
           gi|332646687|gb|AEE80208.1| brassinosteroid-responsive
           RING-H2 [Arabidopsis thaliana]
          Length = 170

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -1

Query: 112 MGFPVGYTELFLPKLLIQVLTFLGLIRNVISVIFRFV 2
           MGFPVGYTE+FLPKL +Q L+ LG IR ++  IFRF+
Sbjct: 1   MGFPVGYTEVFLPKLFVQTLSILGFIRTIVFSIFRFL 37


>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -1

Query: 112 MGFPVGYTELFLPKLLIQVLTFLGLIRNVISVIFRFV 2
           MGFPVGYTEL LPKLL+  L+ LG IR +IS  FRF+
Sbjct: 1   MGFPVGYTELLLPKLLLHTLSLLGFIRKLISYFFRFL 37


>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -1

Query: 112 MGFPVGYTELFLPKLLIQVLTFLGLIRNVISVIFRFV 2
           MGFPVGYTEL LPKLLI  L+ LG IR +I+ +FR++
Sbjct: 1   MGFPVGYTELLLPKLLIHTLSILGFIRKLINTLFRYL 37


>ref|XP_002302597.1| predicted protein [Populus trichocarpa] gi|222844323|gb|EEE81870.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/37 (59%), Positives = 31/37 (83%)
 Frame = -1

Query: 112 MGFPVGYTELFLPKLLIQVLTFLGLIRNVISVIFRFV 2
           MGFPVGY+E+FLPKL + +L+FLG IRN+I  +F ++
Sbjct: 1   MGFPVGYSEVFLPKLFVHILSFLGFIRNLILCLFNYL 37


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