BLASTX nr result

ID: Atractylodes22_contig00026812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026812
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524141.1| conserved hypothetical protein [Ricinus comm...    49   1e-10
ref|XP_002321817.1| predicted protein [Populus trichocarpa] gi|2...    53   2e-10
ref|XP_003631238.1| PREDICTED: uncharacterized protein LOC100854...    52   5e-09
gb|ABK23488.1| unknown [Picea sitchensis]                              38   2e-06

>ref|XP_002524141.1| conserved hypothetical protein [Ricinus communis]
           gi|223536608|gb|EEF38252.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score = 48.5 bits (114), Expect(4) = 1e-10
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
 Frame = -3

Query: 358 NYFTFPFVVGFTLAYYWVQA*WD*CLGVCYCVFIWPKY*GRPEA-TWTS*SALHRGPDAD 182
           +YFTFP +VG T+ Y WV      C G+C   F WPKY G+P   T    + + R P+ D
Sbjct: 175 HYFTFPNIVGVTVPYAWVGYSGTQCPGMCAYPFAWPKYSGKPPPNTKGGGNNIMRPPNGD 234

Query: 181 I----KIRIIAQDL 152
                 I +IA +L
Sbjct: 235 AAVDGMISVIAHEL 248



 Score = 36.2 bits (82), Expect(4) = 1e-10
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 15/66 (22%)
 Frame = -2

Query: 155 LTGVSNNQLTNTWYVPDYLTTPTK-TD*CV--------GSVQGEV-----GECYNVKGIK 18
           L  VS+N L N WY  D  T+PT+  D C+        G   G+V     G+ YNV G+K
Sbjct: 248 LAEVSSNPLVNAWYAGDDPTSPTEIADLCLGVYGTGGGGGYVGKVYKDSWGDGYNVNGVK 307

Query: 17  -RRFLL 3
            R+FL+
Sbjct: 308 GRKFLV 313



 Score = 23.1 bits (48), Expect(4) = 1e-10
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 491 VPTVIKIVISTTYNVSPLHYHNGL 420
           + +VIK  ++T     PL+ HNGL
Sbjct: 130 IQSVIKTAVNTYPRPLPLNPHNGL 153



 Score = 21.6 bits (44), Expect(4) = 1e-10
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 411 LTSLDI*IQNFCMTFIG 361
           LTS D+ +Q+FC    G
Sbjct: 157 LTSADVQVQDFCRAVCG 173


>ref|XP_002321817.1| predicted protein [Populus trichocarpa] gi|222868813|gb|EEF05944.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 52.8 bits (125), Expect(4) = 2e-10
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = -3

Query: 358 NYFTFPFVVGFTLAYYWVQA*WD*CLGVCYCVFIWPKY*GRPEATWTS*SALHRGPDAD 182
           +YFTFP +VG T+ Y WV      C G+C   F WPKY G+P  +    + + R P+ D
Sbjct: 154 HYFTFPTIVGVTVPYAWVGYSGTQCPGMCAYPFAWPKYSGKPPPSTNGGNNIMRAPNGD 212



 Score = 35.4 bits (80), Expect(4) = 2e-10
 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 15/66 (22%)
 Frame = -2

Query: 155 LTGVSNNQLTNTWYVPDYLTTPTK-TD*CV--------GSVQGEV-----GECYNVKGIK 18
           L  VS+N   N WY  D  T+PT+  D C+        G   G+V     G+ YNV G+K
Sbjct: 226 LAEVSSNPFINAWYAGDDPTSPTEIADLCLGVYGTGGGGGFVGKVNKDSWGDGYNVNGVK 285

Query: 17  -RRFLL 3
            RRFL+
Sbjct: 286 GRRFLV 291



 Score = 20.4 bits (41), Expect(4) = 2e-10
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 485 TVIKIVISTTYNVSPLHYHNGL 420
           ++IK  ++      PL+ HNGL
Sbjct: 111 SIIKSAVTAHPRALPLNPHNGL 132



 Score = 20.4 bits (41), Expect(4) = 2e-10
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 411 LTSLDI*IQNFCMTFIG 361
           LTS D+ +Q+FC    G
Sbjct: 136 LTSGDVQVQDFCRAVCG 152


>ref|XP_003631238.1| PREDICTED: uncharacterized protein LOC100854077 [Vitis vinifera]
           gi|147798990|emb|CAN61638.1| hypothetical protein
           VITISV_008459 [Vitis vinifera]
          Length = 334

 Score = 52.4 bits (124), Expect(2) = 5e-09
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -3

Query: 358 NYFTFPFVVGFTLAYYWVQA*WD*CLGVCYCVFIWPKY*GRPEATWTS*SALHRGPDADI 179
           +YFTFP +VG T+ Y WV      C G+C   F WPKY GRP  +    + +   P+ D 
Sbjct: 179 HYFTFPTIVGVTVPYAWVGYSGTQCPGMCAYPFAWPKYSGRPPPSTNGGNNIMGAPNGDA 238

Query: 178 ----KIRIIAQDL 152
                I +IA +L
Sbjct: 239 GVDGMISVIAHEL 251



 Score = 33.1 bits (74), Expect(2) = 5e-09
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 15/66 (22%)
 Frame = -2

Query: 155 LTGVSNNQLTNTWYVPDYLTTPTK-TD*CV--------GSVQGEV-----GECYNVKGIK 18
           L  +S+N L N WY  D  T PT+  D C+        G   G V     G  YNV G+K
Sbjct: 251 LAEMSSNPLVNAWYAGDDPTAPTEIADLCMGVYGSGGGGGYIGNVYKDSWGNGYNVNGVK 310

Query: 17  -RRFLL 3
            R+FL+
Sbjct: 311 GRKFLV 316


>gb|ABK23488.1| unknown [Picea sitchensis]
          Length = 344

 Score = 37.7 bits (86), Expect(3) = 2e-06
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = -3

Query: 358 NYFTFPFVVGFTLAYYWVQA*WD*CLGVCYCVFIWPKY 245
           +YFTFP +VG+TL Y WV      C  VC   F  P Y
Sbjct: 197 HYFTFPSIVGYTLPYAWVGHSGKQCPEVCAYPFAVPSY 234



 Score = 36.6 bits (83), Expect(3) = 2e-06
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 14/65 (21%)
 Frame = -2

Query: 155 LTGVSNNQLTNTWYVPDYLTTPTK-TD*CV--------GSVQGEV-----GECYNVKGIK 18
           L  +S+N L N WY  +  T PT+  D C         GS  G+V     G  YNV GI+
Sbjct: 261 LAELSSNPLINAWYAGEDPTAPTEIADLCEGLYGTGGGGSYTGQVLTDKFGANYNVNGIR 320

Query: 17  RRFLL 3
           RR+L+
Sbjct: 321 RRYLV 325



 Score = 21.2 bits (43), Expect(3) = 2e-06
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 411 LTSLDI*IQNFCMTFIG 361
           LTS D+ +Q+FC    G
Sbjct: 179 LTSSDVAVQDFCRAVCG 195


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