BLASTX nr result

ID: Atractylodes22_contig00026789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026789
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280903.2| PREDICTED: APO protein 3, mitochondrial-like...   114   1e-23
ref|NP_568945.2| APO protein 3 [Arabidopsis thaliana] gi|1865326...   103   2e-20
ref|XP_002866462.1| hypothetical protein ARALYDRAFT_496364 [Arab...   102   4e-20
ref|XP_002511090.1| translation factor sui1, putative [Ricinus c...   102   4e-20
ref|XP_003518320.1| PREDICTED: APO protein 3, mitochondrial-like...    98   7e-19

>ref|XP_002280903.2| PREDICTED: APO protein 3, mitochondrial-like [Vitis vinifera]
           gi|297733881|emb|CBI15128.3| unnamed protein product
           [Vitis vinifera]
          Length = 418

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/111 (52%), Positives = 76/111 (68%)
 Frame = -2

Query: 335 MRRRYLSSAIIVHFDSLMKLQLCSTHFLGHSRTLSVETTKAPDAKNDHLYADIPKPAKSK 156
           M+RR +S      +   +  QL    F    RTL    T   +  +D LYAD+P+P + K
Sbjct: 1   MQRRIISQ---FSYSKRVHCQLSPIFFFASRRTL----TLGGEGVDDPLYADVPRPCRRK 53

Query: 155 SVRKPYPMPMKILVRKAKQEREARKAQPCKLLEEPPENGLLVPELVGVAHQ 3
           S RKPYP PMKIL+R+AK+E+EARKAQP ++LE+PP+NGLLVPEL+GVAHQ
Sbjct: 54  SERKPYPTPMKILIRRAKEEKEARKAQPSRVLEDPPDNGLLVPELIGVAHQ 104


>ref|NP_568945.2| APO protein 3 [Arabidopsis thaliana]
           gi|186532654|ref|NP_001119475.1| APO protein 3
           [Arabidopsis thaliana]
           gi|68565076|sp|Q9FH50.1|APO3_ARATH RecName: Full=APO
           protein 3, mitochondrial; Flags: Precursor
           gi|9758392|dbj|BAB08879.1| unnamed protein product
           [Arabidopsis thaliana] gi|332010155|gb|AED97538.1| APO
           protein 3 [Arabidopsis thaliana]
           gi|332010156|gb|AED97539.1| APO protein 3 [Arabidopsis
           thaliana]
          Length = 402

 Score =  103 bits (257), Expect = 2e-20
 Identities = 46/68 (67%), Positives = 56/68 (82%)
 Frame = -2

Query: 209 DAKNDHLYADIPKPAKSKSVRKPYPMPMKILVRKAKQEREARKAQPCKLLEEPPENGLLV 30
           D   D LYAD+PKP K KS RKPYP PMK L+R+AK+E++ RK QPC++LE+PP+NGLLV
Sbjct: 36  DNDEDPLYADVPKPPKDKSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLV 95

Query: 29  PELVGVAH 6
           PELV VAH
Sbjct: 96  PELVDVAH 103


>ref|XP_002866462.1| hypothetical protein ARALYDRAFT_496364 [Arabidopsis lyrata subsp.
           lyrata] gi|297312297|gb|EFH42721.1| hypothetical protein
           ARALYDRAFT_496364 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score =  102 bits (254), Expect = 4e-20
 Identities = 47/77 (61%), Positives = 61/77 (79%)
 Frame = -2

Query: 236 LSVETTKAPDAKNDHLYADIPKPAKSKSVRKPYPMPMKILVRKAKQEREARKAQPCKLLE 57
           L V+ +   D  +D LYAD+PKP K KS RKPYP PMK L+R+AK+E++ RK QPC++LE
Sbjct: 26  LDVDVSVVDD--DDPLYADVPKPRKDKSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLE 83

Query: 56  EPPENGLLVPELVGVAH 6
           +PP+NG+LVPELV VAH
Sbjct: 84  DPPDNGILVPELVDVAH 100


>ref|XP_002511090.1| translation factor sui1, putative [Ricinus communis]
           gi|223550205|gb|EEF51692.1| translation factor sui1,
           putative [Ricinus communis]
          Length = 414

 Score =  102 bits (254), Expect = 4e-20
 Identities = 55/112 (49%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
 Frame = -2

Query: 335 MRRRYLSSAIIV-HFDSLMKLQLCSTHFLGHSRTLSVETTKAPDAKNDHLYADIPKPAKS 159
           M++R +   +++    S +   LC +   G S TL       P      LYADIPKP + 
Sbjct: 1   MQKRLICDRMLLKRLHSCLNQSLCFSS--GRSLTLIGAQADNP------LYADIPKPRRD 52

Query: 158 KSVRKPYPMPMKILVRKAKQEREARKAQPCKLLEEPPENGLLVPELVGVAHQ 3
            S RKPYP P+K+L+++AKQEREARK QPC++LE PP+NGLLVPELV VAH+
Sbjct: 53  TSERKPYPTPIKVLIQRAKQEREARKVQPCRVLEHPPDNGLLVPELVEVAHR 104


>ref|XP_003518320.1| PREDICTED: APO protein 3, mitochondrial-like [Glycine max]
          Length = 427

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
 Frame = -2

Query: 260 HFLGHSRTLSVETTKAPDAKNDH--LYADIPKPAKSKSVRKPYPMPMKILVRKAKQEREA 87
           H L  + + + ET  AP A  D    Y+D+PKP +  S RKPY  PMK L+ +AK EREA
Sbjct: 18  HHLIPTLSFASETWPAPAASVDDGFPYSDVPKPKRRNSERKPYVTPMKALIERAKAEREA 77

Query: 86  RKAQPCKLLEEPPENGLLVPELVGVAHQ 3
           RKAQPC++LEEPPENGLLVPELV VA +
Sbjct: 78  RKAQPCRVLEEPPENGLLVPELVEVARR 105


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