BLASTX nr result

ID: Atractylodes22_contig00026768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026768
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59984.1| hypothetical protein VITISV_042692 [Vitis vinifera]    66   3e-09
ref|XP_002317968.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002514697.1| hypothetical protein RCOM_1470550 [Ricinus c...    58   7e-07

>emb|CAN59984.1| hypothetical protein VITISV_042692 [Vitis vinifera]
          Length = 312

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/79 (49%), Positives = 50/79 (63%)
 Frame = -2

Query: 245 PSSQSGSTQVNLLIDDSNEPTPSGPETRKLNGDASQRSNRYNTRSTRVQSGKGGAVGNSN 66
           P  +S S   +  +DDS+E    GPE+RKL  D S R +R+N RSTR   GKG A GNS 
Sbjct: 100 PGVRSNSILDSSRMDDSSECNTVGPESRKLLMDVSLRPSRHNARSTRGILGKGVASGNSL 159

Query: 65  RSIKIRNQKDSNKSMRVCE 9
           R  K+RNQ+DS K ++ CE
Sbjct: 160 RLGKMRNQRDS-KGLKTCE 177


>ref|XP_002317968.1| predicted protein [Populus trichocarpa] gi|222858641|gb|EEE96188.1|
            predicted protein [Populus trichocarpa]
          Length = 1244

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -2

Query: 245  PSSQSGSTQVNLLIDDSNEPTPSGPETRKLN-GDASQRSNRYNTRSTRVQSGKGGAVGNS 69
            P+ +S     NL  +D+NE      E +K + GD  QRSNRYN+RS RV +GK G  GNS
Sbjct: 1122 PAMRSNPIVENLPTEDANESNQQISELKKSSQGDILQRSNRYNSRSMRVSTGKAGTFGNS 1181

Query: 68   NRSIKIRNQKD 36
             R  K+R+Q+D
Sbjct: 1182 IRGGKMRSQRD 1192


>ref|XP_002514697.1| hypothetical protein RCOM_1470550 [Ricinus communis]
            gi|223546301|gb|EEF47803.1| hypothetical protein
            RCOM_1470550 [Ricinus communis]
          Length = 1809

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/60 (50%), Positives = 39/60 (65%)
 Frame = -2

Query: 215  NLLIDDSNEPTPSGPETRKLNGDASQRSNRYNTRSTRVQSGKGGAVGNSNRSIKIRNQKD 36
            N  I+DS E      E +K++GD   RSNRYN ++TRV SGK G +GN+ R  K R+QKD
Sbjct: 1701 NFPIEDSGESNQQSSEPKKVHGDIPLRSNRYNAKNTRVSSGK-GVLGNNIRGGKTRSQKD 1759


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