BLASTX nr result

ID: Atractylodes22_contig00026766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026766
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266482.1| PREDICTED: general transcription factor IIH ...   108   4e-22
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|2...   108   7e-22
ref|XP_004147953.1| PREDICTED: general transcription factor IIH ...   102   3e-20
ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arab...   102   4e-20
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]              102   5e-20

>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
           vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
           product [Vitis vinifera]
          Length = 70

 Score =  108 bits (271), Expect = 4e-22
 Identities = 52/67 (77%), Positives = 58/67 (86%)
 Frame = -3

Query: 336 AAKGIFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSNVDGMIRSAIQEFREK 157
           A KG+FISCDIPMAQFIIN NAS+P SQKFIIH+LD THLFV  +V  MIRSAI EFRE+
Sbjct: 4   ATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEFREQ 63

Query: 156 NTYEKPA 136
           N+YEKPA
Sbjct: 64  NSYEKPA 70


>ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|222871123|gb|EEF08254.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  108 bits (269), Expect = 7e-22
 Identities = 51/67 (76%), Positives = 58/67 (86%)
 Frame = -3

Query: 336 AAKGIFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSNVDGMIRSAIQEFREK 157
           A KG+FISCDIPMAQFIIN NASLP SQKFIIHILD TH+FV  +V  MIRSAI +FRE+
Sbjct: 4   ATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDFREQ 63

Query: 156 NTYEKPA 136
           N+YEKP+
Sbjct: 64  NSYEKPS 70


>ref|XP_004147953.1| PREDICTED: general transcription factor IIH subunit 5-like [Cucumis
           sativus] gi|449494289|ref|XP_004159503.1| PREDICTED:
           general transcription factor IIH subunit 5-like [Cucumis
           sativus]
          Length = 70

 Score =  102 bits (255), Expect = 3e-20
 Identities = 49/66 (74%), Positives = 56/66 (84%)
 Frame = -3

Query: 336 AAKGIFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSNVDGMIRSAIQEFREK 157
           A KG+FISCDIPMAQFIINYNASLP S +FIIHILD TH+FV  +V  MIR+AI EFRE+
Sbjct: 4   AIKGMFISCDIPMAQFIINYNASLPASHRFIIHILDNTHMFVQPHVADMIRNAISEFREQ 63

Query: 156 NTYEKP 139
            +YEKP
Sbjct: 64  ISYEKP 69


>ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp.
           lyrata] gi|297335775|gb|EFH66192.1| hypothetical protein
           ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata]
          Length = 71

 Score =  102 bits (254), Expect = 4e-20
 Identities = 46/66 (69%), Positives = 56/66 (84%)
 Frame = -3

Query: 336 AAKGIFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSNVDGMIRSAIQEFREK 157
           A KG+FISCDIPM QFI+N N S+P SQKFIIH+LD THLFV  +V+ MIRSAI +FR++
Sbjct: 4   AIKGVFISCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDFRDQ 63

Query: 156 NTYEKP 139
           N+YEKP
Sbjct: 64  NSYEKP 69


>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
          Length = 113

 Score =  102 bits (253), Expect = 5e-20
 Identities = 45/66 (68%), Positives = 56/66 (84%)
 Frame = -3

Query: 336 AAKGIFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSNVDGMIRSAIQEFREK 157
           A KG+F+SCDIPM QFI+N N S+P SQKFIIH+LD THLFV  +V+ MIRSAI +FR++
Sbjct: 46  AIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDFRDQ 105

Query: 156 NTYEKP 139
           N+YEKP
Sbjct: 106 NSYEKP 111


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