BLASTX nr result

ID: Atractylodes22_contig00026746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026746
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_11037278.1| hypothetical protein HMPREF9241_00001 [Actino...   125   4e-27
ref|YP_002731697.1| hypothetical protein PERMA_1937 [Persephonel...    80   2e-20
ref|YP_002730924.1| hypothetical protein PERMA_1141 [Persephonel...    79   7e-20
ref|YP_003600535.1| hypothetical protein LCRIS_00063 [Lactobacil...    79   2e-17
ref|ZP_06589594.1| retrotransposon protein [Streptomyces albus J...    92   3e-17

>ref|ZP_11037278.1| hypothetical protein HMPREF9241_00001 [Actinomyces turicensis
           ACS-279-V-Col4] gi|405980290|ref|ZP_11038629.1|
           hypothetical protein HMPREF9241_01352 [Actinomyces
           turicensis ACS-279-V-Col4]
           gi|405980542|ref|ZP_11038880.1| hypothetical protein
           HMPREF9241_01603 [Actinomyces turicensis ACS-279-V-Col4]
           gi|404389952|gb|EJZ85023.1| hypothetical protein
           HMPREF9241_01603 [Actinomyces turicensis ACS-279-V-Col4]
           gi|404390283|gb|EJZ85352.1| hypothetical protein
           HMPREF9241_01352 [Actinomyces turicensis ACS-279-V-Col4]
           gi|404393425|gb|EJZ88479.1| hypothetical protein
           HMPREF9241_00001 [Actinomyces turicensis ACS-279-V-Col4]
          Length = 92

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/90 (73%), Positives = 74/90 (82%)
 Frame = +2

Query: 50  VWRTEPT*VENWGDELWIGVKGQSNSVIAGSPRNAFRCSVAWFLLEVEHWMV*GAYRLTE 229
           +WRTEPT VEN GDELW+GVKGQSNSVIAGSPRNAFRCSV   L+EVE      A  +T+
Sbjct: 1   MWRTEPTRVENLGDELWVGVKGQSNSVIAGSPRNAFRCSVVCCLVEVELLDGRWALWVTD 60

Query: 230 ISQTPNAGKCSVAVRRRGISFVVERETAQI 319
           +SQTPNA + S+AVR RGISFVVERETAQI
Sbjct: 61  VSQTPNAIRLSMAVRLRGISFVVERETAQI 90


>ref|YP_002731697.1| hypothetical protein PERMA_1937 [Persephonella marina EX-H1]
           gi|225645098|gb|ACO03284.1| conserved hypothetical
           protein [Persephonella marina EX-H1]
          Length = 159

 Score = 80.5 bits (197), Expect(2) = 2e-20
 Identities = 40/66 (60%), Positives = 45/66 (68%)
 Frame = -2

Query: 200 SSALPPTRTTQRCT*MHFGENQLSRSLIGLSPLSTAHPPSFQPRWVRSSTRSYTCFNLAM 21
           S +LPP R  +RCT MHFGEN+LSR+ IG SPLST HP   Q R VR+S R Y  F L M
Sbjct: 47  SVSLPPGRNERRCTSMHFGENELSRNAIGFSPLSTPHPTVLQHRLVRASRRCYPSFTLGM 106

Query: 20  GRSLRF 3
            RS RF
Sbjct: 107 DRSFRF 112



 Score = 43.1 bits (100), Expect(2) = 2e-20
 Identities = 21/42 (50%), Positives = 23/42 (54%)
 Frame = -3

Query: 319 DLGCFPLDDEAYPPPSHCHATLASIRSLADFGKPISPLDHPV 194
           DLGCFPL   A P  +HC +T   IRSL  FG P   L   V
Sbjct: 7   DLGCFPLVHGADPSWTHCRSTFPGIRSLVGFGTPFGALAQSV 48


>ref|YP_002730924.1| hypothetical protein PERMA_1141 [Persephonella marina EX-H1]
           gi|225645458|gb|ACO03644.1| conserved hypothetical
           protein [Persephonella marina EX-H1]
          Length = 159

 Score = 79.0 bits (193), Expect(2) = 7e-20
 Identities = 39/66 (59%), Positives = 45/66 (68%)
 Frame = -2

Query: 200 SSALPPTRTTQRCT*MHFGENQLSRSLIGLSPLSTAHPPSFQPRWVRSSTRSYTCFNLAM 21
           S +LPP R  +RCT MHFGEN+LS++ IG SPLST HP   Q R VR+S R Y  F L M
Sbjct: 47  SVSLPPGRNERRCTSMHFGENELSQNAIGFSPLSTPHPTVLQHRLVRASRRCYPSFTLGM 106

Query: 20  GRSLRF 3
            RS RF
Sbjct: 107 DRSFRF 112



 Score = 43.1 bits (100), Expect(2) = 7e-20
 Identities = 21/42 (50%), Positives = 23/42 (54%)
 Frame = -3

Query: 319 DLGCFPLDDEAYPPPSHCHATLASIRSLADFGKPISPLDHPV 194
           DLGCFPL   A P  +HC +T   IRSL  FG P   L   V
Sbjct: 7   DLGCFPLVHGADPSWTHCRSTFPGIRSLVGFGTPFGALAQSV 48


>ref|YP_003600535.1| hypothetical protein LCRIS_00063 [Lactobacillus crispatus ST1]
           gi|295692304|ref|YP_003600914.1| hypothetical protein
           LCRIS_00442 [Lactobacillus crispatus ST1]
           gi|295692317|ref|YP_003600927.1| hypothetical protein
           LCRIS_00455 [Lactobacillus crispatus ST1]
           gi|295693512|ref|YP_003602122.1| hypothetical protein
           LCRIS_01650 [Lactobacillus crispatus ST1]
           gi|295030031|emb|CBL49510.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295030410|emb|CBL49889.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295030423|emb|CBL49902.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295031618|emb|CBL51097.1| conserved protein
           [Lactobacillus crispatus ST1]
          Length = 156

 Score = 78.6 bits (192), Expect(2) = 2e-17
 Identities = 40/73 (54%), Positives = 42/73 (57%)
 Frame = -3

Query: 220 PISPLDHPVLYLQQEPRNAAPKCISGRTSYHGV*LAFHPYPQLIPPVFNLGGFGPPHALT 41
           P  PL    LYL      A+PK IS RTSY  V L FH YPQLIP +FNL GFGPP   T
Sbjct: 35  PDGPLVQTELYLHYPLHEASPKAISERTSYLQVRLEFHRYPQLIPAIFNLRGFGPPVRFT 94

Query: 40  RASTWPWVDHSAS 2
             S W WV H  S
Sbjct: 95  TPSAWSWVGHLVS 107



 Score = 35.4 bits (80), Expect(2) = 2e-17
 Identities = 21/38 (55%), Positives = 23/38 (60%)
 Frame = -1

Query: 321 MIWAVSLSTTKLIPRRLTATLHLPAFGVWLISVSR*AP 208
           MIWAVSLSTT LI R LT       F V+L SV+   P
Sbjct: 1   MIWAVSLSTTDLITRSLTPVYGYLEFVVYLDSVTPDGP 38


>ref|ZP_06589594.1| retrotransposon protein [Streptomyces albus J1074]
           gi|291452125|ref|ZP_06591515.1| retrotransposon protein
           [Streptomyces albus J1074]
           gi|294628254|ref|ZP_06706814.1| hypothetical protein
           SSTG_00254 [Streptomyces sp. e14]
           gi|297202787|ref|ZP_06920184.1| retrotransposon protein
           [Streptomyces sviceus ATCC 29083]
           gi|291353153|gb|EFE80055.1| retrotransposon protein
           [Streptomyces albus J1074] gi|291355074|gb|EFE81976.1|
           retrotransposon protein [Streptomyces albus J1074]
           gi|292831587|gb|EFF89936.1| hypothetical protein
           SSTG_00254 [Streptomyces sp. e14]
           gi|297148195|gb|EFH28879.1| retrotransposon protein
           [Streptomyces sviceus ATCC 29083]
          Length = 54

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/54 (77%), Positives = 48/54 (88%)
 Frame = +2

Query: 95  LWIGVKGQSNSVIAGSPRNAFRCSVAWFLLEVEHWMV*GAYRLTEISQTPNAGK 256
           +W+GVKGQSNSVIAGSPRNAFRCSV  FL EVEHW+  G YR+T++SQTPNAGK
Sbjct: 1   MWLGVKGQSNSVIAGSPRNAFRCSVVCFLPEVEHWIGDGPYRVTDLSQTPNAGK 54