BLASTX nr result

ID: Atractylodes22_contig00026744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026744
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...    77   1e-12
gb|ABE79576.2| RNA-directed DNA polymerase (Reverse transcriptas...    72   4e-11
gb|ABD28747.2| Putative non-LTR retroelement reverse transcripta...    72   5e-11
ref|XP_003548697.1| PREDICTED: putative ribonuclease H protein A...    72   6e-11
ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/74 (44%), Positives = 45/74 (60%)
 Frame = -1

Query: 298  LESLRSSFFWGGSGEKRKMAWAKWGPVIASKNDGGLGIGSLEAMNLSLLYKWRWRGLSNP 119
            +ES+   FFWGGS +  K++W KW  +   K DGGLG+  L   N SLL KW WR L + 
Sbjct: 1358 IESIFKRFFWGGSEDNNKISWIKWDDICVPKEDGGLGVRRLREFNFSLLGKWCWRMLVDK 1417

Query: 118  DNFWVKVVKAIHGD 77
            +  W  V+KA +G+
Sbjct: 1418 EGLWYCVLKARYGE 1431


>gb|ABE79576.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 556

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/66 (48%), Positives = 42/66 (63%)
 Frame = -1

Query: 274 FWGGSGEKRKMAWAKWGPVIASKNDGGLGIGSLEAMNLSLLYKWRWRGLSNPDNFWVKVV 95
           F GGS + RK+AW KW  +   K DGGLG+  L   NLSLL KW WR L + +  W +V+
Sbjct: 350 FLGGSEDNRKIAWIKWDSICVPKEDGGLGVRRLGEFNLSLLGKWCWRMLVDKEGLWYRVL 409

Query: 94  KAIHGD 77
           KA +G+
Sbjct: 410 KARYGE 415


>gb|ABD28747.2| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 193

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/73 (43%), Positives = 45/73 (61%)
 Frame = -1

Query: 298 LESLRSSFFWGGSGEKRKMAWAKWGPVIASKNDGGLGIGSLEAMNLSLLYKWRWRGLSNP 119
           +ESL + FFWGG  EKRK++W +W  +   K  GGLG+  L   N++L+ KW WR L   
Sbjct: 43  IESLFNKFFWGGGEEKRKISWVRWDTLSLRKEYGGLGVTRLREFNIALVGKWCWRLLLER 102

Query: 118 DNFWVKVVKAIHG 80
           +  W KV+ A +G
Sbjct: 103 EALWRKVLVARYG 115


>ref|XP_003548697.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 600

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 25/68 (36%), Positives = 42/68 (61%)
 Frame = -1

Query: 298 LESLRSSFFWGGSGEKRKMAWAKWGPVIASKNDGGLGIGSLEAMNLSLLYKWRWRGLSNP 119
           + +++  F WGG  E RK+AW  W    + K+ GGLGI  ++++N +LL+KW+W     P
Sbjct: 200 ISAIQRKFLWGGKQEGRKIAWVSWRQCCSPKHKGGLGIRDIQSLNQALLFKWKWMMFQQP 259

Query: 118 DNFWVKVV 95
           D  W +++
Sbjct: 260 DQLWTRIL 267


>ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|222840624|gb|EEE78171.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/91 (41%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
 Frame = -1

Query: 280 SFFWGGSGEKRKMAWAKWGPVIASKNDGGLGIGSLEAMNLSLLYKWRWRGLSNPDNFWVK 101
           +F W G  E RK+    W  V   K  GGLGIGSL   N +LLYKW WR  S   + W +
Sbjct: 170 AFLWSGKEESRKLCNVSWTIVTLPKRIGGLGIGSLRDKNKALLYKWLWRLGSEDTSLWKE 229

Query: 100 VVKAIHGDYCFQNMS---FKGKG-LWHQMVS 20
           VVK IH   CF  +      G G  W +M++
Sbjct: 230 VVKFIHNINCFSFLPQALISGAGSTWTRMIN 260


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