BLASTX nr result

ID: Atractylodes22_contig00026672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026672
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]                         297   1e-78
ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus c...   294   1e-77
ref|XP_002298107.1| peptide deformylase [Populus trichocarpa] gi...   293   3e-77
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   283   3e-74
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo...   281   1e-73

>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
          Length = 274

 Score =  297 bits (761), Expect = 1e-78
 Identities = 159/244 (65%), Positives = 182/244 (74%), Gaps = 5/244 (2%)
 Frame = -3

Query: 718 MEGIQRLSHRLPPLPIAGKCST-----LARTASFHTPIPVIRFQYKPIINPEFSPSKSAI 554
           ME +QR S RL P+ +A KC       + R     T  P+ RF    I  PEF  S    
Sbjct: 1   METLQRFSLRLLPISLAEKCLNPYTHGVPRAV---TLAPLSRFARMSISKPEFLSSNPKS 57

Query: 553 KVHFITKKRGIGSSSTALARAGWFLGLGEKKKKKNTTDLPEIVKAGDPVLHEPAREVSPD 374
             H          SS+  A+AGWFLGLGEKKK    T  P+IVKAGDPVLHEPAREV P+
Sbjct: 58  TFHN-------SFSSSLTAKAGWFLGLGEKKK----TSFPDIVKAGDPVLHEPAREVDPE 106

Query: 373 EIGSDRIQKVIDDMVKVMRGAPGVGLAAPQIGIPLKIIVLEDTEEYIGYAPKEETKSQDR 194
           EIGS+RIQK+IDDM+K MR APGVGLAAPQIG+PL+IIVLEDT+EYI YAPKEETK+QDR
Sbjct: 107 EIGSERIQKIIDDMIKAMRMAPGVGLAAPQIGVPLRIIVLEDTKEYIRYAPKEETKAQDR 166

Query: 193 RPFDLLVIINPNLQKKSNKSALFFEGCLSIDGFRALVERFLDVEVTGLDRYGQPIKVAAS 14
           RPFDLLVI+NP L+KKSN++A FFEGCLS+DGFRA+VER+LDVEVTGL RYGQPIKV AS
Sbjct: 167 RPFDLLVILNPKLEKKSNRTAFFFEGCLSVDGFRAVVERYLDVEVTGLSRYGQPIKVNAS 226

Query: 13  GWQA 2
           GWQA
Sbjct: 227 GWQA 230


>ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223543236|gb|EEF44768.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 266

 Score =  294 bits (753), Expect = 1e-77
 Identities = 157/239 (65%), Positives = 184/239 (76%)
 Frame = -3

Query: 718 MEGIQRLSHRLPPLPIAGKCSTLARTASFHTPIPVIRFQYKPIINPEFSPSKSAIKVHFI 539
           ME + R S RL P+ +A KC    +    H   P+ R    PI  P+F  +      + I
Sbjct: 1   METLHRFSLRLLPISLADKC---LKPTKHH---PIYRLTRIPISKPDFRTTIP----YSI 50

Query: 538 TKKRGIGSSSTALARAGWFLGLGEKKKKKNTTDLPEIVKAGDPVLHEPAREVSPDEIGSD 359
           T+K     SS+++A+AGW LGLGE KK      LP+IVKAGDPVLHEPAREV PDEIGS+
Sbjct: 51  TRK---SLSSSSIAKAGWLLGLGENKKMS----LPDIVKAGDPVLHEPAREVDPDEIGSE 103

Query: 358 RIQKVIDDMVKVMRGAPGVGLAAPQIGIPLKIIVLEDTEEYIGYAPKEETKSQDRRPFDL 179
           RIQK+IDDMVKVMR APGVGLAAPQIG+PL+IIVLEDT EYIGYAPKEETK+QDRRPFDL
Sbjct: 104 RIQKIIDDMVKVMRRAPGVGLAAPQIGVPLRIIVLEDTTEYIGYAPKEETKAQDRRPFDL 163

Query: 178 LVIINPNLQKKSNKSALFFEGCLSIDGFRALVERFLDVEVTGLDRYGQPIKVAASGWQA 2
           LVI+NP L+KK N++ALFFEGCLS+DGFRA+VER L+VEV+GLDR GQPIKV ASGWQA
Sbjct: 164 LVILNPKLKKKGNRTALFFEGCLSVDGFRAVVERSLEVEVSGLDRSGQPIKVDASGWQA 222


>ref|XP_002298107.1| peptide deformylase [Populus trichocarpa]
           gi|222845365|gb|EEE82912.1| peptide deformylase [Populus
           trichocarpa]
          Length = 299

 Score =  293 bits (750), Expect = 3e-77
 Identities = 161/245 (65%), Positives = 181/245 (73%), Gaps = 1/245 (0%)
 Frame = -3

Query: 733 SKSSRMEGIQRLSHRLPPLPIAGKCSTLARTASFHTPIPVI-RFQYKPIINPEFSPSKSA 557
           S S  ME + R S RL P+ +A KC          T +P I RF    +  PEF      
Sbjct: 29  SSSYHMESLHRCSLRLLPISLAEKCFK-------PTTLPTIFRFTRMLVPKPEFMNPNP- 80

Query: 556 IKVHFITKKRGIGSSSTALARAGWFLGLGEKKKKKNTTDLPEIVKAGDPVLHEPAREVSP 377
              HF T+K     SS+  A+AGW LG+GEKKK    T LP+IVKAGDPVLHEPAREV P
Sbjct: 81  ---HFTTRK---SLSSSHTAKAGWLLGMGEKKK----TSLPDIVKAGDPVLHEPAREVDP 130

Query: 376 DEIGSDRIQKVIDDMVKVMRGAPGVGLAAPQIGIPLKIIVLEDTEEYIGYAPKEETKSQD 197
            EIGS+RIQK+IDDMVKVMR APGVGLAAPQIGIPL+IIVLEDT EYIGYAPK ETK+QD
Sbjct: 131 KEIGSERIQKIIDDMVKVMRMAPGVGLAAPQIGIPLRIIVLEDTAEYIGYAPKNETKAQD 190

Query: 196 RRPFDLLVIINPNLQKKSNKSALFFEGCLSIDGFRALVERFLDVEVTGLDRYGQPIKVAA 17
           RRPFDLLVI+NP L+KKSN++A FFEGCLS+DGFRA+VER LDVEV GL R GQPIKV A
Sbjct: 191 RRPFDLLVIVNPKLKKKSNRTAFFFEGCLSVDGFRAIVERHLDVEVIGLSRDGQPIKVDA 250

Query: 16  SGWQA 2
           SGWQA
Sbjct: 251 SGWQA 255


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  283 bits (724), Expect = 3e-74
 Identities = 152/239 (63%), Positives = 178/239 (74%)
 Frame = -3

Query: 718 MEGIQRLSHRLPPLPIAGKCSTLARTASFHTPIPVIRFQYKPIINPEFSPSKSAIKVHFI 539
           ME I R S RL P+ +A +C    R  S   P       ++ +I+   S S +  K  FI
Sbjct: 1   MEAIHRFSFRLFPISLAERC----RKPSLLPP------NFRKLIHRPISSSPNIPK--FI 48

Query: 538 TKKRGIGSSSTALARAGWFLGLGEKKKKKNTTDLPEIVKAGDPVLHEPAREVSPDEIGSD 359
              +   SSST++A+AGWFLGLGE+KK      LP IVKAGDPVLHEPAREV P EIGS+
Sbjct: 49  PVPKTYSSSSTSIAKAGWFLGLGEQKKMS----LPSIVKAGDPVLHEPAREVDPKEIGSE 104

Query: 358 RIQKVIDDMVKVMRGAPGVGLAAPQIGIPLKIIVLEDTEEYIGYAPKEETKSQDRRPFDL 179
           ++QK+IDDM+  MR APGVGLAAPQIGIPL+IIVLEDT+EYI YAPKEE K+QDRR FDL
Sbjct: 105 KVQKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDL 164

Query: 178 LVIINPNLQKKSNKSALFFEGCLSIDGFRALVERFLDVEVTGLDRYGQPIKVAASGWQA 2
           LVIINP L+ KSNK+ALFFEGCLS+DGFRA+VER+LDVEV G DR G PIKV ASGWQA
Sbjct: 165 LVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQA 223


>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  281 bits (718), Expect = 1e-73
 Identities = 151/239 (63%), Positives = 177/239 (74%)
 Frame = -3

Query: 718 MEGIQRLSHRLPPLPIAGKCSTLARTASFHTPIPVIRFQYKPIINPEFSPSKSAIKVHFI 539
           ME I R S RL P+ +A +C    R  S   P       ++ +I+   S S +  K  FI
Sbjct: 1   MEAIHRFSFRLFPISLAERC----RKPSLLPP------NFRKLIHRPISSSPNIPK--FI 48

Query: 538 TKKRGIGSSSTALARAGWFLGLGEKKKKKNTTDLPEIVKAGDPVLHEPAREVSPDEIGSD 359
              +   SSST++A+AGWFLGLGE+KK      LP IVKAGDPVLHEPAREV P EIGS+
Sbjct: 49  PVPKTYSSSSTSIAKAGWFLGLGEQKKMS----LPSIVKAGDPVLHEPAREVDPKEIGSE 104

Query: 358 RIQKVIDDMVKVMRGAPGVGLAAPQIGIPLKIIVLEDTEEYIGYAPKEETKSQDRRPFDL 179
           ++ K+IDDM+  MR APGVGLAAPQIGIPL+IIVLEDT+EYI YAPKEE K+QDRR FDL
Sbjct: 105 KVXKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFDL 164

Query: 178 LVIINPNLQKKSNKSALFFEGCLSIDGFRALVERFLDVEVTGLDRYGQPIKVAASGWQA 2
           LVIINP L+ KSNK+ALFFEGCLS+DGFRA+VER+LDVEV G DR G PIKV ASGWQA
Sbjct: 165 LVIINPKLKSKSNKTALFFEGCLSVDGFRAVVERYLDVEVAGFDRDGNPIKVDASGWQA 223


Top