BLASTX nr result

ID: Atractylodes22_contig00026628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026628
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528944.1| transcription initiation factor tfiid, putat...    66   3e-09
ref|NP_171987.1| transcription initiation factor TFIID subunit D...    65   6e-09
ref|XP_003518649.1| PREDICTED: transcription initiation factor T...    65   6e-09
ref|XP_003621904.1| Transcription initiation factor TFIID subuni...    65   6e-09
dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   6e-09

>ref|XP_002528944.1| transcription initiation factor tfiid, putative [Ricinus communis]
           gi|223531590|gb|EEF33418.1| transcription initiation
           factor tfiid, putative [Ricinus communis]
          Length = 542

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/47 (72%), Positives = 35/47 (74%)
 Frame = -3

Query: 143 MSIVPKETVEVIAQSIGIXXXXXXXXXXXAPDVEYRMREIMQEAIKC 3
           MSIVPKET+EVIAQSIGI            PDVEYRMREIMQEAIKC
Sbjct: 1   MSIVPKETIEVIAQSIGITNLSEDAALSLTPDVEYRMREIMQEAIKC 47


>ref|NP_171987.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
           thaliana] gi|30679057|ref|NP_849592.1| transcription
           initiation factor TFIID subunit D5 [Arabidopsis
           thaliana] gi|79316742|ref|NP_001030969.1| transcription
           initiation factor TFIID subunit D5 [Arabidopsis
           thaliana] gi|7211972|gb|AAF40443.1|AC004809_1 Strong
           similarity to the TATA binding protein-associated factor
           from A. thaliana gb|Y13673. ESTs gb|N38153 and gb|W43450
           come from this gene [Arabidopsis thaliana]
           gi|15293057|gb|AAK93639.1| putative TATA binding
           protein-associated factor [Arabidopsis thaliana]
           gi|20259031|gb|AAM14231.1| putative TATA binding
           protein-associated factor [Arabidopsis thaliana]
           gi|39545920|gb|AAR28023.1| TAF6 [Arabidopsis thaliana]
           gi|332189645|gb|AEE27766.1| transcription initiation
           factor TFIID subunit D5 [Arabidopsis thaliana]
           gi|332189646|gb|AEE27767.1| transcription initiation
           factor TFIID subunit D5 [Arabidopsis thaliana]
           gi|332189647|gb|AEE27768.1| transcription initiation
           factor TFIID subunit D5 [Arabidopsis thaliana]
          Length = 549

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/47 (74%), Positives = 36/47 (76%)
 Frame = -3

Query: 143 MSIVPKETVEVIAQSIGIXXXXXXXXXXXAPDVEYRMREIMQEAIKC 3
           MSIVPKETVEVIAQSIGI           APDVEYR+REIMQEAIKC
Sbjct: 1   MSIVPKETVEVIAQSIGITNLLPEAALMLAPDVEYRVREIMQEAIKC 47


>ref|XP_003518649.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
           [Glycine max]
          Length = 544

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/47 (72%), Positives = 36/47 (76%)
 Frame = -3

Query: 143 MSIVPKETVEVIAQSIGIXXXXXXXXXXXAPDVEYRMREIMQEAIKC 3
           MSIVPKET+EVIAQSIGI           APDVEYRMR+IMQEAIKC
Sbjct: 1   MSIVPKETIEVIAQSIGINNLSHDVALAVAPDVEYRMRQIMQEAIKC 47


>ref|XP_003621904.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
           gi|355496919|gb|AES78122.1| Transcription initiation
           factor TFIID subunit [Medicago truncatula]
          Length = 562

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/47 (72%), Positives = 36/47 (76%)
 Frame = -3

Query: 143 MSIVPKETVEVIAQSIGIXXXXXXXXXXXAPDVEYRMREIMQEAIKC 3
           MSIVPKET+EVIAQSIGI           APDVEYRMR+IMQEAIKC
Sbjct: 1   MSIVPKETIEVIAQSIGINNLSPDVALSVAPDVEYRMRQIMQEAIKC 47


>dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 547

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/47 (72%), Positives = 36/47 (76%)
 Frame = -3

Query: 143 MSIVPKETVEVIAQSIGIXXXXXXXXXXXAPDVEYRMREIMQEAIKC 3
           MSIVPKET+EVIAQSIGI           APDVEYR+REIMQEAIKC
Sbjct: 1   MSIVPKETIEVIAQSIGIPSLPADVSAALAPDVEYRLREIMQEAIKC 47


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