BLASTX nr result

ID: Atractylodes22_contig00026607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026607
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34639.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...   136   2e-30
dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                        134   6e-30
ref|XP_004173129.1| PREDICTED: nuclear pore complex protein Nup9...   127   1e-27
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ...   127   1e-27

>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/81 (79%), Positives = 67/81 (82%)
 Frame = -1

Query: 293 QSSLFGGQATSPAFGSAGFGQPSFGGQRGGSRVTLYAQTPEADSGSGTQPAGKLESISAM 114
           QSS FG QAT+P FG  GFGQ +FGGQRGGSRV  Y  T E DSGSGTQP GKLESISAM
Sbjct: 308 QSSPFGAQATTPTFGGTGFGQSAFGGQRGGSRVAAYTPTTEVDSGSGTQPVGKLESISAM 367

Query: 113 PAYKEKSHEELRWEDYQLGDK 51
           P YK+KSHEELRWEDYQLGDK
Sbjct: 368 PVYKDKSHEELRWEDYQLGDK 388


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
           [Vitis vinifera]
          Length = 1013

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/81 (79%), Positives = 67/81 (82%)
 Frame = -1

Query: 293 QSSLFGGQATSPAFGSAGFGQPSFGGQRGGSRVTLYAQTPEADSGSGTQPAGKLESISAM 114
           QSS FG QAT+P FG  GFGQ +FGGQRGGSRV  Y  T E DSGSGTQP GKLESISAM
Sbjct: 291 QSSPFGAQATTPTFGGTGFGQSAFGGQRGGSRVAAYTPTTEVDSGSGTQPVGKLESISAM 350

Query: 113 PAYKEKSHEELRWEDYQLGDK 51
           P YK+KSHEELRWEDYQLGDK
Sbjct: 351 PVYKDKSHEELRWEDYQLGDK 371


>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/80 (78%), Positives = 68/80 (85%)
 Frame = -1

Query: 290 SSLFGGQATSPAFGSAGFGQPSFGGQRGGSRVTLYAQTPEADSGSGTQPAGKLESISAMP 111
           SS FG Q +SPAFGS GFG  +FGGQRGGSRV  Y  T EAD+G+GTQPAGKLESISAMP
Sbjct: 293 SSTFGAQTSSPAFGSPGFGSSTFGGQRGGSRVAAYTPTAEADAGTGTQPAGKLESISAMP 352

Query: 110 AYKEKSHEELRWEDYQLGDK 51
            YK+KSHEELRWEDYQLGDK
Sbjct: 353 VYKDKSHEELRWEDYQLGDK 372


>ref|XP_004173129.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like, partial
           [Cucumis sativus]
          Length = 436

 Score =  127 bits (318), Expect = 1e-27
 Identities = 65/82 (79%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
 Frame = -1

Query: 293 QSSLFGGQATSPAFGSAGFGQPSFGGQRGGSRVTLYAQTPEADSGSG-TQPAGKLESISA 117
           QSS FG Q+TS +FG++GFGQ  FGGQRGGSRVT YA TPE D GSG TQ AGKLESISA
Sbjct: 108 QSSPFGAQSTS-SFGTSGFGQAGFGGQRGGSRVTPYAPTPEPDPGSGSTQAAGKLESISA 166

Query: 116 MPAYKEKSHEELRWEDYQLGDK 51
           MP YK+KSHEELRWEDYQLGDK
Sbjct: 167 MPVYKDKSHEELRWEDYQLGDK 188


>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
          Length = 994

 Score =  127 bits (318), Expect = 1e-27
 Identities = 65/82 (79%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
 Frame = -1

Query: 293 QSSLFGGQATSPAFGSAGFGQPSFGGQRGGSRVTLYAQTPEADSGSG-TQPAGKLESISA 117
           QSS FG Q+TS +FG++GFGQ  FGGQRGGSRVT YA TPE D GSG TQ AGKLESISA
Sbjct: 300 QSSPFGAQSTS-SFGTSGFGQAGFGGQRGGSRVTPYAPTPEPDPGSGSTQAAGKLESISA 358

Query: 116 MPAYKEKSHEELRWEDYQLGDK 51
           MP YK+KSHEELRWEDYQLGDK
Sbjct: 359 MPVYKDKSHEELRWEDYQLGDK 380


Top