BLASTX nr result

ID: Atractylodes22_contig00026589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026589
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts ...   439   e-121
ref|NP_192850.2| putative translation elongation factor Ts [Arab...   405   e-111
ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondri...   403   e-110
ref|XP_002872550.1| hypothetical protein ARALYDRAFT_489950 [Arab...   400   e-109
ref|XP_004140737.1| PREDICTED: elongation factor Ts, mitochondri...   400   e-109

>ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts precursor [Solanum
            lycopersicum] gi|5669636|gb|AAD46403.1|AF096247_1
            ethylene-responsive elongation factor EF-Ts precursor
            [Solanum lycopersicum]
          Length = 391

 Score =  439 bits (1128), Expect = e-121
 Identities = 239/349 (68%), Positives = 278/349 (79%)
 Frame = -2

Query: 1048 MMFSRGAKQSIEILCRRVSTPIHSRYGYSTQAYREHLFSEPKRNGSGPYIPNYVSERCAC 869
            M+F RG K+ I I+ + +++ I S + YST     +  ++     SG Y   + +   +C
Sbjct: 1    MVFYRGVKRPIAIIYKSLNSSICSGHDYSTLTRYGNSIAK-----SGGYFHQHGNGPRSC 55

Query: 868  VMPMRKYSSEASSSDHTNLIKKLRERTSAPIKEVKSALIDCNWDLEAAQKELRKRGIVLA 689
             + +R+YS+E SSS+  NLIK+LRERTSAPIKEVK+AL+  NWD+EAAQK+LRKRGIVLA
Sbjct: 56   AVSIRRYSAEISSSEQMNLIKQLRERTSAPIKEVKAALVTSNWDIEAAQKDLRKRGIVLA 115

Query: 688  SKKSSRTAAEGLLALAQNDTKAAVIELNCETDFVARNEIFQYXXXXXXXXXXXXXXSGQV 509
            SKKSSRTAAEGLLALAQN+ KAAVIELNCETDFVARNEIFQY              S Q 
Sbjct: 116  SKKSSRTAAEGLLALAQNERKAAVIELNCETDFVARNEIFQYLALSLAKLALLLEGSQQS 175

Query: 508  SGAFPVGPQSLEDLKISFDHPKLNGERTVQNAITEVAAMMGENVKLRRGFAMSMSKHGVM 329
              AFP+G   LE+LK++ DHPKL+GE++VQNAITEVAAMMGENVKLRRGFAMS    GV+
Sbjct: 176  FAAFPIG--HLEELKLNLDHPKLSGEKSVQNAITEVAAMMGENVKLRRGFAMSAPSLGVI 233

Query: 328  STYLHTCPQPGLGRIAGILSLEVEDENASLDAVQRVGSELAMHVVAAKPLVLTKELVSSD 149
            STYLHT PQPG+GRIAGILSLEVED+N S DA+QRVGSELAMHVVAAKPL LTKE VSSD
Sbjct: 234  STYLHTSPQPGVGRIAGILSLEVEDKNVSEDALQRVGSELAMHVVAAKPLFLTKEDVSSD 293

Query: 148  AVQNEREILKSQAESSGRPQAAIEKMVEGRLRKYFEEVVLMEQKFIVND 2
            A+ NEREILKSQAESSG+PQ A+EKMVEGRLRKYFEEVVLMEQKFIVND
Sbjct: 294  ALSNEREILKSQAESSGKPQIAVEKMVEGRLRKYFEEVVLMEQKFIVND 342


>ref|NP_192850.2| putative translation elongation factor Ts [Arabidopsis thaliana]
            gi|75287865|sp|Q5XF75.1|EFTS_ARATH RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|52627103|gb|AAU84678.1| At4g11120 [Arabidopsis
            thaliana] gi|55167888|gb|AAV43776.1| At4g11120
            [Arabidopsis thaliana] gi|332657575|gb|AEE82975.1|
            putative translation elongation factor Ts [Arabidopsis
            thaliana]
          Length = 395

 Score =  405 bits (1042), Expect = e-111
 Identities = 225/353 (63%), Positives = 267/353 (75%), Gaps = 4/353 (1%)
 Frame = -2

Query: 1048 MMFSRGAKQSIEILCRRVSTPIHSRYGYSTQAYREHLFSEPKRNGSGPYIPN-YVSERCA 872
            M F+R  ++ I +    VS+   S   YST A +    S+ K +     +P+ Y S    
Sbjct: 1    MAFARAVRRPIGVFYYSVSSRFSSGNEYSTVASKFETLSQYKSS-----VPSGYTSLVRG 55

Query: 871  CVMPMRKYSSEA--SSSDHTNLIKKLRERTSAPIKEVKSALIDCNWDLEAAQKELRKRGI 698
                +R +SSEA  + SD  +LIK+LRERTSAPIK+VK++L++CNWDLEAAQK+LRKRG 
Sbjct: 56   FGNFIRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGK 115

Query: 697  VLASKKSSRTAAEGLLALAQNDTKAAVIELNCETDFVARNEIFQYXXXXXXXXXXXXXXS 518
            VLASKKSSRTAAEG+LA+AQN+ K AVIELNCETDFVARNEIFQY              S
Sbjct: 116  VLASKKSSRTAAEGMLAVAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESS 175

Query: 517  GQ-VSGAFPVGPQSLEDLKISFDHPKLNGERTVQNAITEVAAMMGENVKLRRGFAMSMSK 341
             Q VSG FP GP+  E+ K++ DHPK+NGE TV NA+TEVAA+MGENVK RRGF MS S 
Sbjct: 176  SQQVSGVFPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSS 235

Query: 340  HGVMSTYLHTCPQPGLGRIAGILSLEVEDENASLDAVQRVGSELAMHVVAAKPLVLTKEL 161
             GV+S YLHT PQPGLGRIAGI+SLEVE EN  L+A+QRVGSELAMHVVAAKPL L+K+L
Sbjct: 236  AGVLSAYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMHVVAAKPLFLSKDL 295

Query: 160  VSSDAVQNEREILKSQAESSGRPQAAIEKMVEGRLRKYFEEVVLMEQKFIVND 2
            VSS+A+ NEREILKSQAES+G+ Q AIEK+VEGRLRKYFEEV LMEQKFIVND
Sbjct: 296  VSSEAMANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFIVND 348


>ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondrial [Vitis vinifera]
           gi|297738982|emb|CBI28227.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  403 bits (1036), Expect = e-110
 Identities = 207/286 (72%), Positives = 247/286 (86%), Gaps = 1/286 (0%)
 Frame = -2

Query: 856 RKYSSEASSSDHTNLIKKLRERTSAPIKEVKSALIDCNWDLEAAQKELRKRGIVLASKKS 677
           R++S+EA +S+H NLIK+LRERTS+PIK+VK+ALIDCNWD+EAAQKELRKRG VLASK S
Sbjct: 45  RRFSAEAPASEHMNLIKQLRERTSSPIKDVKAALIDCNWDIEAAQKELRKRGKVLASKMS 104

Query: 676 SRTAAEGLLALAQNDTKAAVIELNCETDFVARNEIFQYXXXXXXXXXXXXXXSG-QVSGA 500
           +RTAA+GLLALAQN+T+AAVIELNCETDFVARN+IFQY                   +G 
Sbjct: 105 ARTAAQGLLALAQNETRAAVIELNCETDFVARNDIFQYLASSLAKLALSVENPPLSAAGV 164

Query: 499 FPVGPQSLEDLKISFDHPKLNGERTVQNAITEVAAMMGENVKLRRGFAMSMSKHGVMSTY 320
            PVGP+ LEDLK++FDHPK +GE TVQNAITEVAAMMGENV+LRRGF MS + +G++STY
Sbjct: 165 SPVGPEYLEDLKMNFDHPKFSGETTVQNAITEVAAMMGENVRLRRGFLMS-TPNGIVSTY 223

Query: 319 LHTCPQPGLGRIAGILSLEVEDENASLDAVQRVGSELAMHVVAAKPLVLTKELVSSDAVQ 140
           LHTCP+PGLGRIAG+LSLE ED+ +  DA+QRVGSELAMHVVAAKPL LT+ELVSS+A++
Sbjct: 224 LHTCPRPGLGRIAGVLSLEAEDQLSLSDALQRVGSELAMHVVAAKPLFLTRELVSSEAME 283

Query: 139 NEREILKSQAESSGRPQAAIEKMVEGRLRKYFEEVVLMEQKFIVND 2
           +EREIL+SQAES+G+ Q AIEKMVEGRL+KY EEVVLMEQKF+VND
Sbjct: 284 SEREILRSQAESTGKSQLAIEKMVEGRLKKYVEEVVLMEQKFVVND 329


>ref|XP_002872550.1| hypothetical protein ARALYDRAFT_489950 [Arabidopsis lyrata subsp.
            lyrata] gi|297318387|gb|EFH48809.1| hypothetical protein
            ARALYDRAFT_489950 [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score =  400 bits (1029), Expect = e-109
 Identities = 221/351 (62%), Positives = 261/351 (74%), Gaps = 2/351 (0%)
 Frame = -2

Query: 1048 MMFSRGAKQSIEILCRRVSTPIHSRYGYSTQAYREHLFSEPKRNGSGPYIPNYVSERCAC 869
            M F+R  ++ I +    VS    S   YST A +    S+ K + S      Y S     
Sbjct: 1    MAFARAVRRPIGVFYYSVSGRFSSGNDYSTVASKLETLSQYKSSVSS----GYTSPVRGF 56

Query: 868  VMPMRKYSSEASS-SDHTNLIKKLRERTSAPIKEVKSALIDCNWDLEAAQKELRKRGIVL 692
               +R +SSEA + SD  +LIK+LRERTSAPIK+VK++L++CNWDLEAAQK+LRKRG VL
Sbjct: 57   GSFIRSFSSEAPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGKVL 116

Query: 691  ASKKSSRTAAEGLLALAQNDTKAAVIELNCETDFVARNEIFQYXXXXXXXXXXXXXXSGQ 512
            ASKKSSRTAAEG+LA+AQN+ K  VIELNCETDFVARNEIFQY              S Q
Sbjct: 117  ASKKSSRTAAEGMLAVAQNEGKVVVIELNCETDFVARNEIFQYLALAMAKHALLVENSSQ 176

Query: 511  -VSGAFPVGPQSLEDLKISFDHPKLNGERTVQNAITEVAAMMGENVKLRRGFAMSMSKHG 335
             VSG  P GP+  E+ K++ DHPK+NGE TV NA+TEVAA+MGENVK RRGF MS S  G
Sbjct: 177  QVSGVLPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSSAG 236

Query: 334  VMSTYLHTCPQPGLGRIAGILSLEVEDENASLDAVQRVGSELAMHVVAAKPLVLTKELVS 155
            V+S YLHT PQPGLGRIAGI+SLEVE EN  L+A+QRVGSELAM VVAAKPL L+K+LVS
Sbjct: 237  VLSAYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMQVVAAKPLFLSKDLVS 296

Query: 154  SDAVQNEREILKSQAESSGRPQAAIEKMVEGRLRKYFEEVVLMEQKFIVND 2
            S+A+ NEREILKSQAES+G+ Q AIEK+VEGRLRKYFEEV LMEQKFI+ND
Sbjct: 297  SEAIANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFILND 347


>ref|XP_004140737.1| PREDICTED: elongation factor Ts, mitochondrial-like [Cucumis sativus]
          Length = 401

 Score =  400 bits (1028), Expect = e-109
 Identities = 222/352 (63%), Positives = 262/352 (74%), Gaps = 3/352 (0%)
 Frame = -2

Query: 1048 MMFSRGAKQSIEILCRRVSTPIHSRYGYSTQAYREHLFSEPKRNGSG-PYIPNYVSERCA 872
            M F R  K+SI  L         +R G+S+ A  +    E  + GS  P +    S   +
Sbjct: 1    MAFCRATKRSIGSLISNGLLNNATRNGFSSCATNKIFVVEGVQYGSSVPDVHEANSAIYS 60

Query: 871  CVMPMRKYSSEAS-SSDHTNLIKKLRERTSAPIKEVKSALIDCNWDLEAAQKELRKRGIV 695
             +  +R++S E    S+  +LIK+LRERTSAPIK+VK+ALIDCNWD+EAAQ ELRKRG V
Sbjct: 61   RLSLLRRFSVETPPGSNQMSLIKQLRERTSAPIKDVKAALIDCNWDIEAAQTELRKRGKV 120

Query: 694  LASKKSSRTAAEGLLALAQNDTKAAVIELNCETDFVARNEIFQYXXXXXXXXXXXXXXSG 515
            LA KKS+RTAAEGLLALAQN+TKA VIELNCETDFVARNEIFQY                
Sbjct: 121  LALKKSARTAAEGLLALAQNETKAVVIELNCETDFVARNEIFQYLALSLARQALLTESLS 180

Query: 514  QVS-GAFPVGPQSLEDLKISFDHPKLNGERTVQNAITEVAAMMGENVKLRRGFAMSMSKH 338
                G FP GP+ LE +K++ +HPK+NGE T  NA+TEVAA+MGEN+KLRRGF MS S  
Sbjct: 181  HNDLGTFPFGPEQLEGIKLNLEHPKINGETTAVNAVTEVAAIMGENIKLRRGFLMSASPS 240

Query: 337  GVMSTYLHTCPQPGLGRIAGILSLEVEDENASLDAVQRVGSELAMHVVAAKPLVLTKELV 158
            GV+STYLHT PQPGLGRIAGILSLEVE +N+  DA+QRVGSELAMHVVAAKPL LTKELV
Sbjct: 241  GVISTYLHTSPQPGLGRIAGILSLEVEGDNSQPDALQRVGSELAMHVVAAKPLFLTKELV 300

Query: 157  SSDAVQNEREILKSQAESSGRPQAAIEKMVEGRLRKYFEEVVLMEQKFIVND 2
            +SDA++NEREILKSQAE++G+ Q AIEKMVEGRLRKY EEVVLMEQKFI+ND
Sbjct: 301  ASDALENEREILKSQAETTGKSQMAIEKMVEGRLRKYMEEVVLMEQKFIIND 352


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