BLASTX nr result

ID: Atractylodes22_contig00026575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026575
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    68   9e-10
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    65   7e-09
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    60   3e-07
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    58   1e-06
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...    57   2e-06

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +1

Query: 199 IDPMKQADVQRFGHSDTGGSDQSRNRGYRSLTRTEWEDRRRKGLCYRCGQTFGPA-HKCS 375
           I  +  A   R G +DT      + +G RS+   E  +RR KGLC++CG  + P  HKC 
Sbjct: 272 ISTLSLASTGRKGETDTRTGVSEKWKGVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCP 331

Query: 376 EGDLRVILLADDEYVSDEGDILLMDS 453
           E  LRV++L + E ++DEG+I+ M++
Sbjct: 332 ERALRVLILGEGEALNDEGEIMAMEA 357


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
 Frame = +1

Query: 250  GGSDQSRNRGYRSLTRTEWEDRRRKGLCYRCGQTFGPA-HKCSEGDLRVILLADDEYVSD 426
            GG    R +G RS+   E  +RR KGLC++CG  + P  HKC E  LRV++L + E V++
Sbjct: 914  GGDRVERWKGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNE 973

Query: 427  EGDILLMDSEPLIQ 468
            EG+I+ ++++ +++
Sbjct: 974  EGEIVSLETQEVLE 987


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = +1

Query: 268 RNRGYRSLTRTEWEDRRRKGLCYRCGQTFGPA-HKCSEGDLRVILLADDEYVSDEGDILL 444
           R +G RS+   E+E+RR KGLC++CG  + P  HKC E  LRV++L + E ++ EG+I+ 
Sbjct: 311 RWKGIRSIHNEEFEERRAKGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEGEIVS 370

Query: 445 M 447
           M
Sbjct: 371 M 371


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/61 (39%), Positives = 40/61 (65%)
 Frame = +1

Query: 268 RNRGYRSLTRTEWEDRRRKGLCYRCGQTFGPAHKCSEGDLRVILLADDEYVSDEGDILLM 447
           R+R +  L+  E  +R++KGLC++CG  F P H+C +  LRV++L +DE    EG +L +
Sbjct: 92  RDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKLLAV 151

Query: 448 D 450
           +
Sbjct: 152 E 152


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/63 (39%), Positives = 42/63 (66%)
 Frame = +1

Query: 268 RNRGYRSLTRTEWEDRRRKGLCYRCGQTFGPAHKCSEGDLRVILLADDEYVSDEGDILLM 447
           R++  RSL+  E  DRR+KGLC++CG  + P H+C + +L V++L DD    DE ++ ++
Sbjct: 43  RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDS--EDENEVRVL 100

Query: 448 DSE 456
           + E
Sbjct: 101 NDE 103


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