BLASTX nr result

ID: Atractylodes22_contig00026505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026505
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymera...    80   2e-13
ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymera...    79   3e-13
ref|XP_002308874.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|2...    78   6e-13

>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
           gi|223543547|gb|EEF45077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 473

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 51/109 (46%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
 Frame = -3

Query: 301 VQKNESDSDVKQQEGVTKMKKQLTMV----KPIKRSVAESRGIKPNTERK---LQTVQKR 143
           V K+      ++QE + K  K  T V    +P K+SV +    +   +RK   L T +K 
Sbjct: 334 VAKDNKSHQSRRQEAMRKPNKPSTTVSGPGRPTKQSVEQKANNESKIQRKTDKLVTQRKL 393

Query: 142 P--HQNNVKASGEATAQDKFEATKRKLQERYRQAENAKRQRTIQVMELH 2
           P   Q+  K S +   Q K EATKRKLQERY+QAENAKRQRTIQVMELH
Sbjct: 394 PGGQQDKFKCSDDDAVQKKLEATKRKLQERYQQAENAKRQRTIQVMELH 442


>ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 240

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 15/114 (13%)
 Frame = -3

Query: 298 QKNESDSDVKQQEGVTKMKKQLT-------------MVKPIKRSVAESRGIKPNTERKLQ 158
           Q+   + +V  +E  T+MK+Q+              +++P K S  E +      +RKL+
Sbjct: 100 QQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRPQKLST-EQKDNHEKFQRKLE 158

Query: 157 --TVQKRPHQNNVKASGEATAQDKFEATKRKLQERYRQAENAKRQRTIQVMELH 2
             T+ KR  Q+N K S E   Q K EATKRKLQE Y+QAENAK+QRTIQVMELH
Sbjct: 159 KPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELH 212


>ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 452

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 53/115 (46%), Positives = 69/115 (60%), Gaps = 16/115 (13%)
 Frame = -3

Query: 298 QKNESDSDVKQQEGVTKMKKQLTMVKPIKRSVAES-----RGIKPNTE---------RKL 161
           Q+   + +V  +E  T+MK+Q+  VKP  +  + +     R  K +TE         RKL
Sbjct: 312 QQTTREVNVLSKENKTQMKEQV--VKPNNKPSSNTNSGLLRAQKLSTEQKDNHEKFQRKL 369

Query: 160 Q--TVQKRPHQNNVKASGEATAQDKFEATKRKLQERYRQAENAKRQRTIQVMELH 2
           +  T+ KR  Q+N K S E   Q K EATKRKLQE Y+QAENAK+QRTIQVMELH
Sbjct: 370 EKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELH 424


>ref|XP_002308874.1| predicted protein [Populus trichocarpa] gi|222854850|gb|EEE92397.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
 Frame = -3

Query: 301 VQKNESDSDVKQQEGVTKMKKQLTMV----KPIKRSVAESRGIKPNTERKLQ--TVQKRP 140
           + K+     +++QE + K  K         +P+ ++V +    +P   RK    T Q++P
Sbjct: 344 LSKDNKSQQMRRQEAIVKASKPSNANSGPGRPLMQNVEQKMNQEPQLIRKTDKITSQRKP 403

Query: 139 ---HQNNVKASGEATAQDKFEATKRKLQERYRQAENAKRQRTIQVMELH 2
               Q+ +K S E   Q K EATKRKLQERY+QAENAKRQRTIQVMELH
Sbjct: 404 PTGQQDKLKNSDEVDVQMKLEATKRKLQERYQQAENAKRQRTIQVMELH 452


>ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|222867860|gb|EEF04991.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 50/101 (49%), Positives = 62/101 (61%), Gaps = 18/101 (17%)
 Frame = -3

Query: 250 KMKKQLTMVKPIKRSVAES---RGIKPNTERKLQ------------TVQKRP---HQNNV 125
           +M+KQ  +VK  K S A S   R +K N E+K+             T Q++P    Q+ +
Sbjct: 346 QMRKQEDVVKASKPSNANSGPGRPLKQNVEQKMNQETVLIRKTDKVTSQRKPPTGQQDKL 405

Query: 124 KASGEATAQDKFEATKRKLQERYRQAENAKRQRTIQVMELH 2
           K+S E   Q K EATKRKLQERY+QAE AKRQRTIQVMELH
Sbjct: 406 KSSDEVAVQMKLEATKRKLQERYQQAEKAKRQRTIQVMELH 446


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