BLASTX nr result

ID: Atractylodes22_contig00026498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026498
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [...   119   3e-25
ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002525052.1| conserved hypothetical protein [Ricinus comm...   112   3e-23
ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana] gi|7...   105   5e-21
ref|XP_002872489.1| predicted protein [Arabidopsis lyrata subsp....   105   5e-21

>ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [Vitis vinifera]
           gi|297736457|emb|CBI25328.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/86 (66%), Positives = 70/86 (81%)
 Frame = +2

Query: 2   IITIIHEDIYSSGDQFTLPLQMEYLADIKIKAEPLVTGLATDVHGQLTVLNKGTTDGLGR 181
           ++T+ H DIYSS ++  L LQMEYLADI IKAEPL TGLATDVHGQLTVLNKG  +G G 
Sbjct: 171 LVTVNHGDIYSSMERPALLLQMEYLADILIKAEPLSTGLATDVHGQLTVLNKGICEGQGN 230

Query: 182 SKSKIRNFHYRVKENSIDYFYPGGRT 259
           S+++  NFH++VKENS++ FYPG RT
Sbjct: 231 SRNRTHNFHFKVKENSVECFYPGTRT 256


>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/86 (62%), Positives = 68/86 (79%)
 Frame = +2

Query: 2   IITIIHEDIYSSGDQFTLPLQMEYLADIKIKAEPLVTGLATDVHGQLTVLNKGTTDGLGR 181
           +IT+ HEDIY+S ++ T  LQ +YL D+ IKAEPL TGLA DVHGQLTVLN+   +  G 
Sbjct: 176 LITLNHEDIYTSMERPTFMLQTKYLVDVLIKAEPLATGLAADVHGQLTVLNRDFCNVKGS 235

Query: 182 SKSKIRNFHYRVKENSIDYFYPGGRT 259
           SK+KI NFH++VKENS++YFYPG RT
Sbjct: 236 SKNKISNFHFKVKENSVEYFYPGTRT 261


>ref|XP_002525052.1| conserved hypothetical protein [Ricinus communis]
           gi|223535633|gb|EEF37299.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = +2

Query: 2   IITIIHEDIYSSGDQFTLPLQMEYLADIKIKAEPLVTGLATDVHGQLTVLNKGTTDGLGR 181
           ++T+ HEDIYS+ ++    LQMEYLADI IKAEPL TGLATDVHGQLTVL+ G     G 
Sbjct: 195 LVTLNHEDIYSTMERRAFILQMEYLADILIKAEPLATGLATDVHGQLTVLSTGICCRKGN 254

Query: 182 SKSKIRNFHYRVKENSIDYFYPGGRT 259
            K+KI NF + VKENS++YFYPG RT
Sbjct: 255 LKNKISNFQFMVKENSVEYFYPGSRT 280


>ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana]
           gi|75154680|sp|Q8L9Y2.1|ELP6_ARATH RecName:
           Full=Elongator complex protein 6; Short=AtELP6; AltName:
           Full=Elongator component 6; AltName: Full=UPF0405
           protein ELP6 gi|21593728|gb|AAM65695.1| unknown
           [Arabidopsis thaliana] gi|87116610|gb|ABD19669.1|
           At4g10090 [Arabidopsis thaliana]
           gi|110735719|dbj|BAE99839.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657437|gb|AEE82837.1|
           elongator protein 6 [Arabidopsis thaliana]
          Length = 262

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   IITIIHEDIYSSGDQFTLPLQMEYLADIKIKAEPLVTGLATDVHGQLTVLNKG-TTDGLG 178
           ++ + HEDIY+S ++    LQM  LAD+ IKAEPL +GLA DVHGQLTVLNKG +  G G
Sbjct: 176 LVILNHEDIYASMERPAFLLQMVCLADVVIKAEPLASGLANDVHGQLTVLNKGISNSGRG 235

Query: 179 RSKSKIRNFHYRVKENSIDYFYPGGRT 259
            S++K++NF +R+KEN IDYFYPG R+
Sbjct: 236 SSRNKLQNFQFRIKENGIDYFYPGCRS 262


>ref|XP_002872489.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318326|gb|EFH48748.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   IITIIHEDIYSSGDQFTLPLQMEYLADIKIKAEPLVTGLATDVHGQLTVLNKG-TTDGLG 178
           ++ + HEDIY+S ++    LQM  LAD+ IKAEPL +GLA DVHGQLTVLNKG +  G G
Sbjct: 176 LVILNHEDIYASMERPAFLLQMVCLADVVIKAEPLASGLANDVHGQLTVLNKGISNSGRG 235

Query: 179 RSKSKIRNFHYRVKENSIDYFYPGGRT 259
            S++K++NF +R+KEN IDYFYPG R+
Sbjct: 236 TSRNKLQNFQFRIKENGIDYFYPGCRS 262


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