BLASTX nr result
ID: Atractylodes22_contig00026472
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00026472
(545 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 149 4e-40
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 148 1e-37
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 146 4e-37
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 142 2e-36
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 142 2e-36
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 149 bits (375), Expect(2) = 4e-40
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Frame = +1
Query: 1 EAKGYEFLGKNGVLKVLKGSLVFMKG-VKNGLYSLQADVVKHSAAVVETKVVSQTELWHR 177
+ GY F G GVL+V KG+LV MKG +++G+Y+L V +AAV E TELWHR
Sbjct: 694 DKNGYTFSGSGGVLRVSKGALVVMKGRLQHGIYTLMGSSVLGTAAVEEDNC---TELWHR 750
Query: 178 RLGHVSERGLIXXXXXXXXXXXXXXXXSFCEHCVYGKTCRVRFSAAQHKTRGILDYIHVD 357
RLGH+SE+GL FCE CV GK RV+FS H T G+L+YIH D
Sbjct: 751 RLGHMSEKGLSILSKQGLLSGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGVLEYIHSD 810
Query: 358 LWGPSWVPSHSGSRFFLSIVYDYSRKL*VYIQRTKDETF 474
LWGPS V SHSG R++++ + D+SRK+ VY + KDE F
Sbjct: 811 LWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVF 849
Score = 41.2 bits (95), Expect(2) = 4e-40
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3
Query: 477 KFKSWKTLIEKQTGKLVKVFRTD 545
KFK WKT++EK+TGK+VK RTD
Sbjct: 851 KFKEWKTMVEKRTGKVVKTLRTD 873
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 148 bits (374), Expect(2) = 1e-37
Identities = 74/159 (46%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Frame = +1
Query: 1 EAKGYEFLGKNGVLKVLKGSLVFMKG-VKNGLYSLQADVVKHSAAVVETKVVSQTELWHR 177
+ GY F + L+V +GSL MKG +KNGLY+L V + V + V T+LWH+
Sbjct: 337 DKSGYTFKSEPNSLRVARGSLTVMKGTIKNGLYTLIGQTVTGKVSTVLKEDVGTTKLWHQ 396
Query: 178 RLGHVSERGLIXXXXXXXXXXXXXXXXSFCEHCVYGKTCRVRFSAAQHKTRGILDYIHVD 357
RLGH+S RGL FCEHCV+GK RV+F+ A H+T+ LDYIH D
Sbjct: 397 RLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQLDYIHSD 456
Query: 358 LWGPSWVPSHSGSRFFLSIVYDYSRKL*VYIQRTKDETF 474
LWGPS VPS G+R+FL+++ DYSRK+ +Y + K ETF
Sbjct: 457 LWGPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETF 495
Score = 33.5 bits (75), Expect(2) = 1e-37
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 477 KFKSWKTLIEKQTGKLVKVFRTD 545
KFK WK L+E QT + VK RTD
Sbjct: 497 KFKEWKILVETQTSRKVKKLRTD 519
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 146 bits (369), Expect(2) = 4e-37
Identities = 75/162 (46%), Positives = 102/162 (62%), Gaps = 4/162 (2%)
Frame = +1
Query: 1 EAKGYEFLGKNGVLKVLKGSLVFMKGVKNG--LYSLQADVVKH--SAAVVETKVVSQTEL 168
+A+GY++ G GV+KV KGSLV+M G N LY L+ + +AAVV S+T +
Sbjct: 264 DAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGYVTAAVVSKDEPSKTNM 323
Query: 169 WHRRLGHVSERGLIXXXXXXXXXXXXXXXXSFCEHCVYGKTCRVRFSAAQHKTRGILDYI 348
WH RLGH+SE G+ FCEHCV+GK RV+F+ + H+T+GILDY+
Sbjct: 324 WHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYV 383
Query: 349 HVDLWGPSWVPSHSGSRFFLSIVYDYSRKL*VYIQRTKDETF 474
H DLWGPS PS G+R+ L+I+ DYSRK+ Y + KD+TF
Sbjct: 384 HADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTF 425
Score = 33.5 bits (75), Expect(2) = 4e-37
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 480 FKSWKTLIEKQTGKLVKVFRTD 545
FK WK +I++QT K VKV RTD
Sbjct: 428 FKEWKVMIKRQTEKEVKVLRTD 449
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 142 bits (358), Expect(2) = 2e-36
Identities = 74/162 (45%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Frame = +1
Query: 1 EAKGYEFLGKNGVLKVLKGSLVFMKGVKNG--LYSLQADVVKHS--AAVVETKVVSQTEL 168
+A+GY++ G GV+KV KGSLV+M G N LY L+ + S AA V ++T L
Sbjct: 369 DAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVTKDEPNKTNL 428
Query: 169 WHRRLGHVSERGLIXXXXXXXXXXXXXXXXSFCEHCVYGKTCRVRFSAAQHKTRGILDYI 348
WH RLGH+SE G+ FCE CV+GK RV+F+ + H+T+GILDY+
Sbjct: 429 WHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCERCVFGKHKRVKFNTSVHRTKGILDYV 488
Query: 349 HVDLWGPSWVPSHSGSRFFLSIVYDYSRKL*VYIQRTKDETF 474
H DLWGPS PS G+R+ L+I+ DYSRK+ Y + KD+TF
Sbjct: 489 HADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTF 530
Score = 35.0 bits (79), Expect(2) = 2e-36
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 480 FKSWKTLIEKQTGKLVKVFRTD 545
FK WK +IE+QT K VKV RTD
Sbjct: 533 FKEWKVMIERQTEKEVKVLRTD 554
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 142 bits (358), Expect(2) = 2e-36
Identities = 74/162 (45%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Frame = +1
Query: 1 EAKGYEFLGKNGVLKVLKGSLVFMKGVKNG--LYSLQADVVKHS--AAVVETKVVSQTEL 168
+A+GY++ G GV+KV KGSLV+M G N LY L+ + S AA V S+T L
Sbjct: 309 DAEGYKYSGSGGVVKVSKGSLVYMIGDMNSTNLYVLRGSTLHGSITAAAVSKDEPSKTNL 368
Query: 169 WHRRLGHVSERGLIXXXXXXXXXXXXXXXXSFCEHCVYGKTCRVRFSAAQHKTRGILDYI 348
WH RLGH+SE G+ FCEHCV+GK RV+F+ + H+++GILDY+
Sbjct: 369 WHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRSKGILDYV 428
Query: 349 HVDLWGPSWVPSHSGSRFFLSIVYDYSRKL*VYIQRTKDETF 474
H DLWGPS PS G+ + L+I+ DYSRK+ Y + KD+TF
Sbjct: 429 HADLWGPSRKPSLGGACYMLTIIDDYSRKVWPYFLKHKDDTF 470
Score = 35.0 bits (79), Expect(2) = 2e-36
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 480 FKSWKTLIEKQTGKLVKVFRTD 545
FK WK +IE+QT K VKV RTD
Sbjct: 473 FKEWKVMIERQTEKEVKVLRTD 494